RNA–Protein interactions for RNA: ENST00000568855.1

SMG1P7-202, Transcript of SMG1 pseudogene 7, humanhuman

TSL 2

Gene SMG1P7, Length 1,210 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P7-202ENST00000568855 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
SMG1P7-202ENST00000568855 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
SMG1P7-202ENST00000568855 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
SMG1P7-202ENST00000568855 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
SMG1P7-202ENST00000568855 FOXD1Q16676 465 aa18.25■□□□□ 0.51
SMG1P7-202ENST00000568855 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.49
SMG1P7-202ENST00000568855 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
SMG1P7-202ENST00000568855 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
SMG1P7-202ENST00000568855 ADRA2BP18089 450 aa17.13■□□□□ 0.33
SMG1P7-202ENST00000568855 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
SMG1P7-202ENST00000568855 MSH5O43196 834 aa16.93■□□□□ 0.3
SMG1P7-202ENST00000568855 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
SMG1P7-202ENST00000568855 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
SMG1P7-202ENST00000568855 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
SMG1P7-202ENST00000568855 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
SMG1P7-202ENST00000568855 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
SMG1P7-202ENST00000568855 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
SMG1P7-202ENST00000568855 ABCC9O60706 1549 aa15.4■□□□□ 0.06
SMG1P7-202ENST00000568855 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
SMG1P7-202ENST00000568855 ZCCHC6Q5VYS8 1495 aaKnown RBP15.11■□□□□ 0.01
SMG1P7-202ENST00000568855 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
SMG1P7-202ENST00000568855 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
SMG1P7-202ENST00000568855 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
SMG1P7-202ENST00000568855 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
SMG1P7-202ENST00000568855 NACADO15069 1562 aa14.91□□□□□ -0.02
SMG1P7-202ENST00000568855 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
SMG1P7-202ENST00000568855 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
SMG1P7-202ENST00000568855 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
SMG1P7-202ENST00000568855 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
SMG1P7-202ENST00000568855 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
SMG1P7-202ENST00000568855 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
SMG1P7-202ENST00000568855 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
SMG1P7-202ENST00000568855 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
SMG1P7-202ENST00000568855 KCNA4P22459 653 aa14.52□□□□□ -0.09
SMG1P7-202ENST00000568855 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
SMG1P7-202ENST00000568855 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMG1P7-202ENST00000568855 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
SMG1P7-202ENST00000568855 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
SMG1P7-202ENST00000568855 BICRAQ9NZM4 1560 aa14.41□□□□□ -0.1
SMG1P7-202ENST00000568855 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
SMG1P7-202ENST00000568855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMG1P7-202ENST00000568855 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
SMG1P7-202ENST00000568855 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
SMG1P7-202ENST00000568855 SLC4A2P04920 1241 aa14.02□□□□□ -0.17
SMG1P7-202ENST00000568855 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
SMG1P7-202ENST00000568855 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
SMG1P7-202ENST00000568855 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
SMG1P7-202ENST00000568855 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
SMG1P7-202ENST00000568855 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
SMG1P7-202ENST00000568855 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
SMG1P7-202ENST00000568855 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
SMG1P7-202ENST00000568855 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
SMG1P7-202ENST00000568855 WIZO95785 1651 aa13.83□□□□□ -0.2
SMG1P7-202ENST00000568855 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
SMG1P7-202ENST00000568855 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
SMG1P7-202ENST00000568855 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
SMG1P7-202ENST00000568855 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
SMG1P7-202ENST00000568855 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
SMG1P7-202ENST00000568855 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
SMG1P7-202ENST00000568855 CAPN15O75808 1086 aa13.69□□□□□ -0.22
SMG1P7-202ENST00000568855 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
SMG1P7-202ENST00000568855 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
SMG1P7-202ENST00000568855 DSG3P32926 999 aa13.66□□□□□ -0.22
SMG1P7-202ENST00000568855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
SMG1P7-202ENST00000568855 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
SMG1P7-202ENST00000568855 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
SMG1P7-202ENST00000568855 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
SMG1P7-202ENST00000568855 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
SMG1P7-202ENST00000568855 APLP2Q06481 763 aa13.52□□□□□ -0.25
SMG1P7-202ENST00000568855 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
SMG1P7-202ENST00000568855 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
SMG1P7-202ENST00000568855 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
SMG1P7-202ENST00000568855 ABCB7O75027 752 aa13.43□□□□□ -0.26
SMG1P7-202ENST00000568855 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
SMG1P7-202ENST00000568855 NESP48681 1621 aa13.4□□□□□ -0.26
SMG1P7-202ENST00000568855 ZBTB22O15209 634 aa13.4□□□□□ -0.26
SMG1P7-202ENST00000568855 CFTRP13569 1480 aa13.36□□□□□ -0.27
SMG1P7-202ENST00000568855 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
SMG1P7-202ENST00000568855 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
SMG1P7-202ENST00000568855 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
SMG1P7-202ENST00000568855 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
SMG1P7-202ENST00000568855 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
SMG1P7-202ENST00000568855 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
SMG1P7-202ENST00000568855 POLA2Q14181 598 aa13.22□□□□□ -0.29
SMG1P7-202ENST00000568855 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.3
SMG1P7-202ENST00000568855 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
SMG1P7-202ENST00000568855 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
SMG1P7-202ENST00000568855 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
SMG1P7-202ENST00000568855 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
SMG1P7-202ENST00000568855 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
SMG1P7-202ENST00000568855 CUX1P39880 1505 aa13.08□□□□□ -0.32
SMG1P7-202ENST00000568855 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
SMG1P7-202ENST00000568855 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
SMG1P7-202ENST00000568855 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
SMG1P7-202ENST00000568855 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
SMG1P7-202ENST00000568855 WDR62O43379 1518 aa13.04□□□□□ -0.32
SMG1P7-202ENST00000568855 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
SMG1P7-202ENST00000568855 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
SMG1P7-202ENST00000568855 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
SMG1P7-202ENST00000568855 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms