RNA–Protein interactions for RNA: ENST00000564631.5

TMX3-206, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-206ENST00000564631 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.54
TMX3-206ENST00000564631 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
TMX3-206ENST00000564631 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
TMX3-206ENST00000564631 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
TMX3-206ENST00000564631 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
TMX3-206ENST00000564631 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
TMX3-206ENST00000564631 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
TMX3-206ENST00000564631 ABCC9O60706 1549 aa14.5□□□□□ -0.09
TMX3-206ENST00000564631 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
TMX3-206ENST00000564631 ADRA2BP18089 450 aa14.2□□□□□ -0.14
TMX3-206ENST00000564631 FOXD1Q16676 465 aa14.11□□□□□ -0.15
TMX3-206ENST00000564631 PPP6R1Q9UPN7 881 aa14.1□□□□□ -0.15
TMX3-206ENST00000564631 KCNA4P22459 653 aa13.91□□□□□ -0.18
TMX3-206ENST00000564631 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
TMX3-206ENST00000564631 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
TMX3-206ENST00000564631 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
TMX3-206ENST00000564631 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
TMX3-206ENST00000564631 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
TMX3-206ENST00000564631 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
TMX3-206ENST00000564631 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
TMX3-206ENST00000564631 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
TMX3-206ENST00000564631 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
TMX3-206ENST00000564631 CUX2O14529 1486 aa13.26□□□□□ -0.29
TMX3-206ENST00000564631 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
TMX3-206ENST00000564631 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMX3-206ENST00000564631 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
TMX3-206ENST00000564631 RB1CC1Q8TDY2 1594 aa13.05□□□□□ -0.32
TMX3-206ENST00000564631 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
TMX3-206ENST00000564631 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
TMX3-206ENST00000564631 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
TMX3-206ENST00000564631 ZBTB22O15209 634 aa12.85□□□□□ -0.35
TMX3-206ENST00000564631 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
TMX3-206ENST00000564631 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
TMX3-206ENST00000564631 MSH5O43196 834 aa12.81□□□□□ -0.36
TMX3-206ENST00000564631 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
TMX3-206ENST00000564631 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
TMX3-206ENST00000564631 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
TMX3-206ENST00000564631 SOCS7O14512 581 aa12.62□□□□□ -0.39
TMX3-206ENST00000564631 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
TMX3-206ENST00000564631 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
TMX3-206ENST00000564631 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
TMX3-206ENST00000564631 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
TMX3-206ENST00000564631 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
TMX3-206ENST00000564631 NACADO15069 1562 aa12.51□□□□□ -0.41
TMX3-206ENST00000564631 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
TMX3-206ENST00000564631 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
TMX3-206ENST00000564631 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
TMX3-206ENST00000564631 SHROOM4Q9ULL8 1493 aa12.37□□□□□ -0.43
TMX3-206ENST00000564631 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
TMX3-206ENST00000564631 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
TMX3-206ENST00000564631 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
TMX3-206ENST00000564631 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
TMX3-206ENST00000564631 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
TMX3-206ENST00000564631 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
TMX3-206ENST00000564631 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
TMX3-206ENST00000564631 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
TMX3-206ENST00000564631 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
TMX3-206ENST00000564631 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
TMX3-206ENST00000564631 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
TMX3-206ENST00000564631 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
TMX3-206ENST00000564631 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
TMX3-206ENST00000564631 DISP3Q9P2K9 1392 aa12.11□□□□□ -0.47
TMX3-206ENST00000564631 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
TMX3-206ENST00000564631 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
TMX3-206ENST00000564631 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.5
TMX3-206ENST00000564631 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.5
TMX3-206ENST00000564631 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
TMX3-206ENST00000564631 NESP48681 1621 aa11.95□□□□□ -0.5
TMX3-206ENST00000564631 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
TMX3-206ENST00000564631 HECW2Q9P2P5 1572 aa11.93□□□□□ -0.5
TMX3-206ENST00000564631 FKBP8Q14318 412 aa11.92□□□□□ -0.5
TMX3-206ENST00000564631 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
TMX3-206ENST00000564631 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
TMX3-206ENST00000564631 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
TMX3-206ENST00000564631 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
TMX3-206ENST00000564631 MYO15BQ96JP2 1530 aa11.72□□□□□ -0.53
TMX3-206ENST00000564631 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
TMX3-206ENST00000564631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
TMX3-206ENST00000564631 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
TMX3-206ENST00000564631 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
TMX3-206ENST00000564631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
TMX3-206ENST00000564631 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
TMX3-206ENST00000564631 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
TMX3-206ENST00000564631 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
TMX3-206ENST00000564631 WDR62O43379 1518 aa11.63□□□□□ -0.55
TMX3-206ENST00000564631 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
TMX3-206ENST00000564631 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
TMX3-206ENST00000564631 MRC2Q9UBG0 1479 aa11.58□□□□□ -0.55
TMX3-206ENST00000564631 PDS5BQ9NTI5 1447 aa11.55□□□□□ -0.56
TMX3-206ENST00000564631 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
TMX3-206ENST00000564631 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
TMX3-206ENST00000564631 ADGRL1O94910 1474 aa11.48□□□□□ -0.57
TMX3-206ENST00000564631 KIF13AQ9H1H9 1805 aa11.45□□□□□ -0.58
TMX3-206ENST00000564631 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
TMX3-206ENST00000564631 APLP2Q06481 763 aa11.39□□□□□ -0.59
TMX3-206ENST00000564631 CHD1O14646 1710 aa11.38□□□□□ -0.59
TMX3-206ENST00000564631 KDM6BO15054 1643 aa11.37□□□□□ -0.59
TMX3-206ENST00000564631 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
TMX3-206ENST00000564631 PROM2Q8N271 834 aa11.33□□□□□ -0.6
TMX3-206ENST00000564631 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms