RNA–Protein interactions for RNA: ENST00000561914.5

BBS4-203, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-203ENST00000561914 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
BBS4-203ENST00000561914 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
BBS4-203ENST00000561914 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
BBS4-203ENST00000561914 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
BBS4-203ENST00000561914 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
BBS4-203ENST00000561914 ABCC9O60706 1549 aa16.3■□□□□ 0.2
BBS4-203ENST00000561914 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
BBS4-203ENST00000561914 FOXD1Q16676 465 aa16.03■□□□□ 0.16
BBS4-203ENST00000561914 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
BBS4-203ENST00000561914 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
BBS4-203ENST00000561914 ADRA2BP18089 450 aa15.45■□□□□ 0.06
BBS4-203ENST00000561914 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
BBS4-203ENST00000561914 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
BBS4-203ENST00000561914 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
BBS4-203ENST00000561914 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
BBS4-203ENST00000561914 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
BBS4-203ENST00000561914 NACADO15069 1562 aa15.02■□□□□ -0
BBS4-203ENST00000561914 DNAJC5Q9H3Z4 198 aa14.8□□□□□ -0.04
BBS4-203ENST00000561914 MSH5O43196 834 aa14.79□□□□□ -0.04
BBS4-203ENST00000561914 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
BBS4-203ENST00000561914 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
BBS4-203ENST00000561914 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
BBS4-203ENST00000561914 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
BBS4-203ENST00000561914 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
BBS4-203ENST00000561914 SHROOM4Q9ULL8 1493 aa14.53□□□□□ -0.08
BBS4-203ENST00000561914 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
BBS4-203ENST00000561914 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
BBS4-203ENST00000561914 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
BBS4-203ENST00000561914 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
BBS4-203ENST00000561914 ZCCHC6Q5VYS8 1495 aaKnown RBP14.29□□□□□ -0.12
BBS4-203ENST00000561914 CUX2O14529 1486 aa14.18□□□□□ -0.14
BBS4-203ENST00000561914 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
BBS4-203ENST00000561914 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
BBS4-203ENST00000561914 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
BBS4-203ENST00000561914 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
BBS4-203ENST00000561914 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
BBS4-203ENST00000561914 KCNA4P22459 653 aa14□□□□□ -0.17
BBS4-203ENST00000561914 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
BBS4-203ENST00000561914 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
BBS4-203ENST00000561914 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
BBS4-203ENST00000561914 NESP48681 1621 aa13.86□□□□□ -0.19
BBS4-203ENST00000561914 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
BBS4-203ENST00000561914 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
BBS4-203ENST00000561914 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
BBS4-203ENST00000561914 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
BBS4-203ENST00000561914 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
BBS4-203ENST00000561914 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
BBS4-203ENST00000561914 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
BBS4-203ENST00000561914 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
BBS4-203ENST00000561914 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
BBS4-203ENST00000561914 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
BBS4-203ENST00000561914 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
BBS4-203ENST00000561914 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
BBS4-203ENST00000561914 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
BBS4-203ENST00000561914 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
BBS4-203ENST00000561914 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
BBS4-203ENST00000561914 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
BBS4-203ENST00000561914 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
BBS4-203ENST00000561914 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
BBS4-203ENST00000561914 WDR62O43379 1518 aa13.44□□□□□ -0.26
BBS4-203ENST00000561914 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
BBS4-203ENST00000561914 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
BBS4-203ENST00000561914 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
BBS4-203ENST00000561914 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
BBS4-203ENST00000561914 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
BBS4-203ENST00000561914 CYB5RLQ6IPT4 315 aa13.33□□□□□ -0.28
BBS4-203ENST00000561914 RIMBP3CA6NJZ7 1639 aa13.3□□□□□ -0.28
BBS4-203ENST00000561914 RIMBP3BA6NNM3 1639 aa13.3□□□□□ -0.28
BBS4-203ENST00000561914 RIMBP3Q9UFD9 1639 aa13.3□□□□□ -0.28
BBS4-203ENST00000561914 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
BBS4-203ENST00000561914 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
BBS4-203ENST00000561914 CFTRP13569 1480 aa13.23□□□□□ -0.29
BBS4-203ENST00000561914 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
BBS4-203ENST00000561914 WIZO95785 1651 aa13.18□□□□□ -0.3
BBS4-203ENST00000561914 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
BBS4-203ENST00000561914 FBLN2P98095 1184 aa13.14□□□□□ -0.31
BBS4-203ENST00000561914 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
BBS4-203ENST00000561914 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
BBS4-203ENST00000561914 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
BBS4-203ENST00000561914 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■■■□ 24.3
BBS4-203ENST00000561914 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
BBS4-203ENST00000561914 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
BBS4-203ENST00000561914 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
BBS4-203ENST00000561914 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
BBS4-203ENST00000561914 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
BBS4-203ENST00000561914 CHD1O14646 1710 aa12.94□□□□□ -0.34
BBS4-203ENST00000561914 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
BBS4-203ENST00000561914 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
BBS4-203ENST00000561914 CCDC88BA6NC98 1476 aa12.92□□□□□ -0.34
BBS4-203ENST00000561914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
BBS4-203ENST00000561914 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
BBS4-203ENST00000561914 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
BBS4-203ENST00000561914 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
BBS4-203ENST00000561914 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
BBS4-203ENST00000561914 ZBTB22O15209 634 aa12.87□□□□□ -0.35
BBS4-203ENST00000561914 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
BBS4-203ENST00000561914 SOGA1O94964 1423 aa12.86□□□□□ -0.35
BBS4-203ENST00000561914 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
BBS4-203ENST00000561914 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
BBS4-203ENST00000561914 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms