RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
GABPB1-211ENST00000561010 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
GABPB1-211ENST00000561010 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
GABPB1-211ENST00000561010 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
GABPB1-211ENST00000561010 FOXD1Q16676 465 aa18.5■□□□□ 0.55
GABPB1-211ENST00000561010 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
GABPB1-211ENST00000561010 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
GABPB1-211ENST00000561010 MSH5O43196 834 aa17.22■□□□□ 0.35
GABPB1-211ENST00000561010 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
GABPB1-211ENST00000561010 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-211ENST00000561010 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
GABPB1-211ENST00000561010 ADRA2BP18089 450 aa16.98■□□□□ 0.31
GABPB1-211ENST00000561010 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
GABPB1-211ENST00000561010 ABCC9O60706 1549 aa16.37■□□□□ 0.21
GABPB1-211ENST00000561010 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
GABPB1-211ENST00000561010 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
GABPB1-211ENST00000561010 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
GABPB1-211ENST00000561010 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
GABPB1-211ENST00000561010 NACADO15069 1562 aa15.41■□□□□ 0.06
GABPB1-211ENST00000561010 DCAF8L2P0C7V8 631 aa15.37■□□□□ 0.05
GABPB1-211ENST00000561010 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
GABPB1-211ENST00000561010 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
GABPB1-211ENST00000561010 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
GABPB1-211ENST00000561010 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
GABPB1-211ENST00000561010 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
GABPB1-211ENST00000561010 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
GABPB1-211ENST00000561010 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
GABPB1-211ENST00000561010 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-211ENST00000561010 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
GABPB1-211ENST00000561010 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
GABPB1-211ENST00000561010 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
GABPB1-211ENST00000561010 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
GABPB1-211ENST00000561010 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
GABPB1-211ENST00000561010 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
GABPB1-211ENST00000561010 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
GABPB1-211ENST00000561010 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
GABPB1-211ENST00000561010 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
GABPB1-211ENST00000561010 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
GABPB1-211ENST00000561010 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
GABPB1-211ENST00000561010 KCNA4P22459 653 aa14.62□□□□□ -0.07
GABPB1-211ENST00000561010 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
GABPB1-211ENST00000561010 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
GABPB1-211ENST00000561010 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
GABPB1-211ENST00000561010 NPM3O75607 178 aaKnown RBP14.25□□□□□ -0.13
GABPB1-211ENST00000561010 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
GABPB1-211ENST00000561010 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
GABPB1-211ENST00000561010 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
GABPB1-211ENST00000561010 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
GABPB1-211ENST00000561010 BAZ1AQ9NRL2 1556 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-211ENST00000561010 NESP48681 1621 aa14.1□□□□□ -0.15
GABPB1-211ENST00000561010 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
GABPB1-211ENST00000561010 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.16
GABPB1-211ENST00000561010 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
GABPB1-211ENST00000561010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.167e-8■■■■□ 25
GABPB1-211ENST00000561010 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
GABPB1-211ENST00000561010 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
GABPB1-211ENST00000561010 CUX2O14529 1486 aa14□□□□□ -0.17
GABPB1-211ENST00000561010 WIZO95785 1651 aa13.99□□□□□ -0.17
GABPB1-211ENST00000561010 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
GABPB1-211ENST00000561010 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
GABPB1-211ENST00000561010 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.18
GABPB1-211ENST00000561010 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
GABPB1-211ENST00000561010 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-211ENST00000561010 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-211ENST00000561010 DSG3P32926 999 aa13.77□□□□□ -0.21
GABPB1-211ENST00000561010 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.21
GABPB1-211ENST00000561010 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
GABPB1-211ENST00000561010 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
GABPB1-211ENST00000561010 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-211ENST00000561010 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
GABPB1-211ENST00000561010 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
GABPB1-211ENST00000561010 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
GABPB1-211ENST00000561010 WDR62O43379 1518 aa13.69□□□□□ -0.22
GABPB1-211ENST00000561010 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
GABPB1-211ENST00000561010 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
GABPB1-211ENST00000561010 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
GABPB1-211ENST00000561010 CAPN15O75808 1086 aa13.63□□□□□ -0.23
GABPB1-211ENST00000561010 POTEHQ6S545 545 aa13.63□□□□□ -0.23
GABPB1-211ENST00000561010 CFTRP13569 1480 aa13.62□□□□□ -0.23
GABPB1-211ENST00000561010 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
GABPB1-211ENST00000561010 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
GABPB1-211ENST00000561010 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
GABPB1-211ENST00000561010 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
GABPB1-211ENST00000561010 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
GABPB1-211ENST00000561010 ZBTB22O15209 634 aa13.43□□□□□ -0.26
GABPB1-211ENST00000561010 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
GABPB1-211ENST00000561010 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
GABPB1-211ENST00000561010 ABCB7O75027 752 aa13.4□□□□□ -0.26
GABPB1-211ENST00000561010 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
GABPB1-211ENST00000561010 CHD1O14646 1710 aa13.38□□□□□ -0.27
GABPB1-211ENST00000561010 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
GABPB1-211ENST00000561010 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
GABPB1-211ENST00000561010 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
GABPB1-211ENST00000561010 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
GABPB1-211ENST00000561010 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
GABPB1-211ENST00000561010 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
GABPB1-211ENST00000561010 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
GABPB1-211ENST00000561010 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
GABPB1-211ENST00000561010 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
GABPB1-211ENST00000561010 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms