RNA–Protein interactions for RNA: ENST00000560612.1

RPS17-206, Transcript of ribosomal protein S17, humanhuman

TSL 2

Gene RPS17, Length 1,877 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-206ENST00000560612 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
RPS17-206ENST00000560612 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
RPS17-206ENST00000560612 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
RPS17-206ENST00000560612 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
RPS17-206ENST00000560612 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
RPS17-206ENST00000560612 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
RPS17-206ENST00000560612 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
RPS17-206ENST00000560612 ABCC9O60706 1549 aa14.76□□□□□ -0.05
RPS17-206ENST00000560612 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
RPS17-206ENST00000560612 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
RPS17-206ENST00000560612 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
RPS17-206ENST00000560612 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
RPS17-206ENST00000560612 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
RPS17-206ENST00000560612 NACADO15069 1562 aa14.41□□□□□ -0.1
RPS17-206ENST00000560612 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
RPS17-206ENST00000560612 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
RPS17-206ENST00000560612 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
RPS17-206ENST00000560612 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
RPS17-206ENST00000560612 BICRAQ9NZM4 1560 aa14.04□□□□□ -0.16
RPS17-206ENST00000560612 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
RPS17-206ENST00000560612 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
RPS17-206ENST00000560612 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
RPS17-206ENST00000560612 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
RPS17-206ENST00000560612 KCNA4P22459 653 aa13.91□□□□□ -0.18
RPS17-206ENST00000560612 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPS17-206ENST00000560612 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
RPS17-206ENST00000560612 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
RPS17-206ENST00000560612 WIZO95785 1651 aa13.79□□□□□ -0.2
RPS17-206ENST00000560612 SMARCA4P51532 1647 aa13.77□□□□□ -0.21
RPS17-206ENST00000560612 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
RPS17-206ENST00000560612 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
RPS17-206ENST00000560612 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
RPS17-206ENST00000560612 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
RPS17-206ENST00000560612 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
RPS17-206ENST00000560612 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
RPS17-206ENST00000560612 SMARCA2P51531 1590 aa13.46□□□□□ -0.25
RPS17-206ENST00000560612 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
RPS17-206ENST00000560612 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
RPS17-206ENST00000560612 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
RPS17-206ENST00000560612 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
RPS17-206ENST00000560612 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
RPS17-206ENST00000560612 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
RPS17-206ENST00000560612 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
RPS17-206ENST00000560612 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
RPS17-206ENST00000560612 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
RPS17-206ENST00000560612 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.3
RPS17-206ENST00000560612 ADRA2BP18089 450 aa13.19□□□□□ -0.3
RPS17-206ENST00000560612 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
RPS17-206ENST00000560612 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
RPS17-206ENST00000560612 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
RPS17-206ENST00000560612 CFTRP13569 1480 aa13.02□□□□□ -0.33
RPS17-206ENST00000560612 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
RPS17-206ENST00000560612 NESP48681 1621 aa13.01□□□□□ -0.33
RPS17-206ENST00000560612 HRCP23327 699 aa12.99□□□□□ -0.33
RPS17-206ENST00000560612 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
RPS17-206ENST00000560612 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
RPS17-206ENST00000560612 CUX1P39880 1505 aa12.94□□□□□ -0.34
RPS17-206ENST00000560612 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
RPS17-206ENST00000560612 CADPSQ9ULU8 1353 aa12.93□□□□□ -0.34
RPS17-206ENST00000560612 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
RPS17-206ENST00000560612 KIF21AQ7Z4S6 1674 aa12.92□□□□□ -0.34
RPS17-206ENST00000560612 ZBTB22O15209 634 aa12.91□□□□□ -0.34
RPS17-206ENST00000560612 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
RPS17-206ENST00000560612 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
RPS17-206ENST00000560612 SOGA1O94964 1423 aa12.89□□□□□ -0.35
RPS17-206ENST00000560612 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
RPS17-206ENST00000560612 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
RPS17-206ENST00000560612 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
RPS17-206ENST00000560612 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
RPS17-206ENST00000560612 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
RPS17-206ENST00000560612 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.36
RPS17-206ENST00000560612 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
RPS17-206ENST00000560612 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
RPS17-206ENST00000560612 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
RPS17-206ENST00000560612 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
RPS17-206ENST00000560612 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
RPS17-206ENST00000560612 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
RPS17-206ENST00000560612 ARXQ96QS3 562 aa12.73□□□□□ -0.37
RPS17-206ENST00000560612 BCANQ96GW7 911 aa12.71□□□□□ -0.37
RPS17-206ENST00000560612 POLA1P09884 1462 aaPredicted RBP12.69□□□□□ -0.38
RPS17-206ENST00000560612 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
RPS17-206ENST00000560612 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
RPS17-206ENST00000560612 KIF21BO75037 1637 aa12.68□□□□□ -0.38
RPS17-206ENST00000560612 EEA1Q15075 1411 aa12.67□□□□□ -0.38
RPS17-206ENST00000560612 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
RPS17-206ENST00000560612 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
RPS17-206ENST00000560612 CUX2O14529 1486 aa12.64□□□□□ -0.39
RPS17-206ENST00000560612 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
RPS17-206ENST00000560612 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
RPS17-206ENST00000560612 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
RPS17-206ENST00000560612 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
RPS17-206ENST00000560612 SENP3Q9H4L4 574 aaPredicted RBP12.62□□□□□ -0.39
RPS17-206ENST00000560612 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
RPS17-206ENST00000560612 ABCA5Q8WWZ7 1642 aa12.6□□□□□ -0.39
RPS17-206ENST00000560612 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
RPS17-206ENST00000560612 WDR62O43379 1518 aa12.59□□□□□ -0.39
RPS17-206ENST00000560612 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
RPS17-206ENST00000560612 KIF27Q86VH2 1401 aa12.58□□□□□ -0.4
RPS17-206ENST00000560612 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
RPS17-206ENST00000560612 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms