RNA–Protein interactions for RNA: ENST00000560340.5

AKAP13-218, Transcript of A-kinase anchoring protein 13, humanhuman

TSL 4

Gene AKAP13, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AKAP13-218ENST00000560340 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
AKAP13-218ENST00000560340 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
AKAP13-218ENST00000560340 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
AKAP13-218ENST00000560340 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
AKAP13-218ENST00000560340 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
AKAP13-218ENST00000560340 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
AKAP13-218ENST00000560340 FOXD1Q16676 465 aa18.87■□□□□ 0.61
AKAP13-218ENST00000560340 ABCC9O60706 1549 aa18.62■□□□□ 0.57
AKAP13-218ENST00000560340 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
AKAP13-218ENST00000560340 ADRA2BP18089 450 aa18.56■□□□□ 0.56
AKAP13-218ENST00000560340 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
AKAP13-218ENST00000560340 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
AKAP13-218ENST00000560340 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
AKAP13-218ENST00000560340 KCNA4P22459 653 aa17.69■□□□□ 0.42
AKAP13-218ENST00000560340 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
AKAP13-218ENST00000560340 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
AKAP13-218ENST00000560340 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
AKAP13-218ENST00000560340 MSH5O43196 834 aa17.14■□□□□ 0.33
AKAP13-218ENST00000560340 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
AKAP13-218ENST00000560340 NACADO15069 1562 aa17.13■□□□□ 0.33
AKAP13-218ENST00000560340 DCAF8L2P0C7V8 631 aa17.04■□□□□ 0.32
AKAP13-218ENST00000560340 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
AKAP13-218ENST00000560340 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
AKAP13-218ENST00000560340 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
AKAP13-218ENST00000560340 BICRAQ9NZM4 1560 aa16.93■□□□□ 0.3
AKAP13-218ENST00000560340 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
AKAP13-218ENST00000560340 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
AKAP13-218ENST00000560340 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
AKAP13-218ENST00000560340 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
AKAP13-218ENST00000560340 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
AKAP13-218ENST00000560340 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
AKAP13-218ENST00000560340 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
AKAP13-218ENST00000560340 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
AKAP13-218ENST00000560340 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
AKAP13-218ENST00000560340 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
AKAP13-218ENST00000560340 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
AKAP13-218ENST00000560340 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
AKAP13-218ENST00000560340 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
AKAP13-218ENST00000560340 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
AKAP13-218ENST00000560340 ZBTB22O15209 634 aa16.34■□□□□ 0.21
AKAP13-218ENST00000560340 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
AKAP13-218ENST00000560340 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
AKAP13-218ENST00000560340 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
AKAP13-218ENST00000560340 CUX2O14529 1486 aa16.22■□□□□ 0.19
AKAP13-218ENST00000560340 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
AKAP13-218ENST00000560340 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
AKAP13-218ENST00000560340 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
AKAP13-218ENST00000560340 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
AKAP13-218ENST00000560340 NESP48681 1621 aa15.83■□□□□ 0.12
AKAP13-218ENST00000560340 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
AKAP13-218ENST00000560340 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
AKAP13-218ENST00000560340 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
AKAP13-218ENST00000560340 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
AKAP13-218ENST00000560340 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
AKAP13-218ENST00000560340 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
AKAP13-218ENST00000560340 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
AKAP13-218ENST00000560340 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
AKAP13-218ENST00000560340 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
AKAP13-218ENST00000560340 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
AKAP13-218ENST00000560340 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
AKAP13-218ENST00000560340 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
AKAP13-218ENST00000560340 BAZ1AQ9NRL2 1556 aaPredicted RBP15.47■□□□□ 0.07
AKAP13-218ENST00000560340 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
AKAP13-218ENST00000560340 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
AKAP13-218ENST00000560340 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
AKAP13-218ENST00000560340 WDR62O43379 1518 aa15.39■□□□□ 0.05
AKAP13-218ENST00000560340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
AKAP13-218ENST00000560340 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
AKAP13-218ENST00000560340 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.04
AKAP13-218ENST00000560340 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
AKAP13-218ENST00000560340 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
AKAP13-218ENST00000560340 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
AKAP13-218ENST00000560340 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
AKAP13-218ENST00000560340 MROH2BQ7Z745 1585 aa15.26■□□□□ 0.03
AKAP13-218ENST00000560340 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
AKAP13-218ENST00000560340 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
AKAP13-218ENST00000560340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
AKAP13-218ENST00000560340 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
AKAP13-218ENST00000560340 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
AKAP13-218ENST00000560340 FANCD2Q9BXW9 1451 aa15.18■□□□□ 0.02
AKAP13-218ENST00000560340 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
AKAP13-218ENST00000560340 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
AKAP13-218ENST00000560340 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
AKAP13-218ENST00000560340 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
AKAP13-218ENST00000560340 WIZO95785 1651 aa15.06■□□□□ 0
AKAP13-218ENST00000560340 ZNF608Q9ULD9 1512 aaPredicted RBP15.02■□□□□ -0
AKAP13-218ENST00000560340 CFTRP13569 1480 aa15.02■□□□□ -0
AKAP13-218ENST00000560340 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
AKAP13-218ENST00000560340 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
AKAP13-218ENST00000560340 FKBP8Q14318 412 aa14.93□□□□□ -0.02
AKAP13-218ENST00000560340 CHD1O14646 1710 aa14.91□□□□□ -0.02
AKAP13-218ENST00000560340 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
AKAP13-218ENST00000560340 APLP2Q06481 763 aa14.89□□□□□ -0.03
AKAP13-218ENST00000560340 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
AKAP13-218ENST00000560340 FBLN2P98095 1184 aa14.87□□□□□ -0.03
AKAP13-218ENST00000560340 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
AKAP13-218ENST00000560340 PRDM2Q13029 1718 aa14.83□□□□□ -0.03
AKAP13-218ENST00000560340 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
AKAP13-218ENST00000560340 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
AKAP13-218ENST00000560340 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms