RNA–Protein interactions for RNA: ENST00000559842.1

PRTG-203, Transcript of protogenin, humanhuman

TSL 4

Gene PRTG, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTG-203ENST00000559842 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
PRTG-203ENST00000559842 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
PRTG-203ENST00000559842 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
PRTG-203ENST00000559842 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
PRTG-203ENST00000559842 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
PRTG-203ENST00000559842 FOXD1Q16676 465 aa14.38□□□□□ -0.11
PRTG-203ENST00000559842 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
PRTG-203ENST00000559842 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
PRTG-203ENST00000559842 MSH5O43196 834 aa13.53□□□□□ -0.24
PRTG-203ENST00000559842 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
PRTG-203ENST00000559842 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
PRTG-203ENST00000559842 ADRA2BP18089 450 aa13.25□□□□□ -0.29
PRTG-203ENST00000559842 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
PRTG-203ENST00000559842 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.41
PRTG-203ENST00000559842 DCAF1Q9Y4B6 1507 aa12.36□□□□□ -0.43
PRTG-203ENST00000559842 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
PRTG-203ENST00000559842 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
PRTG-203ENST00000559842 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
PRTG-203ENST00000559842 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
PRTG-203ENST00000559842 KCNA4P22459 653 aa12.17□□□□□ -0.46
PRTG-203ENST00000559842 ABCC9O60706 1549 aa12.16□□□□□ -0.46
PRTG-203ENST00000559842 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
PRTG-203ENST00000559842 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
PRTG-203ENST00000559842 NACADO15069 1562 aa12.1□□□□□ -0.47
PRTG-203ENST00000559842 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
PRTG-203ENST00000559842 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
PRTG-203ENST00000559842 RB1CC1Q8TDY2 1594 aa11.98□□□□□ -0.49
PRTG-203ENST00000559842 SHROOM4Q9ULL8 1493 aa11.88□□□□□ -0.51
PRTG-203ENST00000559842 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
PRTG-203ENST00000559842 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
PRTG-203ENST00000559842 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
PRTG-203ENST00000559842 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
PRTG-203ENST00000559842 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
PRTG-203ENST00000559842 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
PRTG-203ENST00000559842 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
PRTG-203ENST00000559842 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
PRTG-203ENST00000559842 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
PRTG-203ENST00000559842 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.55
PRTG-203ENST00000559842 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
PRTG-203ENST00000559842 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
PRTG-203ENST00000559842 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
PRTG-203ENST00000559842 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
PRTG-203ENST00000559842 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
PRTG-203ENST00000559842 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRTG-203ENST00000559842 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.58
PRTG-203ENST00000559842 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
PRTG-203ENST00000559842 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
PRTG-203ENST00000559842 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
PRTG-203ENST00000559842 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
PRTG-203ENST00000559842 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
PRTG-203ENST00000559842 WIZO95785 1651 aa11.28□□□□□ -0.6
PRTG-203ENST00000559842 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
PRTG-203ENST00000559842 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
PRTG-203ENST00000559842 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
PRTG-203ENST00000559842 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
PRTG-203ENST00000559842 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
PRTG-203ENST00000559842 ZBTB22O15209 634 aa11.19□□□□□ -0.62
PRTG-203ENST00000559842 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
PRTG-203ENST00000559842 HMGXB3Q12766 1538 aa11.16□□□□□ -0.62
PRTG-203ENST00000559842 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
PRTG-203ENST00000559842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRTG-203ENST00000559842 BAZ1BQ9UIG0 1483 aaKnown RBP11.13□□□□□ -0.63
PRTG-203ENST00000559842 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
PRTG-203ENST00000559842 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
PRTG-203ENST00000559842 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
PRTG-203ENST00000559842 ATXN8OSP0DMR3 200 aa10.94□□□□□ -0.66
PRTG-203ENST00000559842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
PRTG-203ENST00000559842 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
PRTG-203ENST00000559842 CFTRP13569 1480 aa10.89□□□□□ -0.67
PRTG-203ENST00000559842 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
PRTG-203ENST00000559842 PRDM2Q13029 1718 aa10.85□□□□□ -0.67
PRTG-203ENST00000559842 SAMD1Q6SPF0 538 aaPredicted RBP10.84□□□□□ -0.67
PRTG-203ENST00000559842 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
PRTG-203ENST00000559842 TRIM41Q8WV44 630 aa10.82□□□□□ -0.68
PRTG-203ENST00000559842 LAMC3Q9Y6N6 1575 aa10.79□□□□□ -0.68
PRTG-203ENST00000559842 WRNQ14191 1432 aaPredicted RBP eCLIP10.79□□□□□ -0.68
PRTG-203ENST00000559842 CAPN15O75808 1086 aa10.79□□□□□ -0.68
PRTG-203ENST00000559842 ABCC8Q09428 1581 aa10.78□□□□□ -0.68
PRTG-203ENST00000559842 APLP2Q06481 763 aa10.77□□□□□ -0.69
PRTG-203ENST00000559842 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
PRTG-203ENST00000559842 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
PRTG-203ENST00000559842 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
PRTG-203ENST00000559842 DSG3P32926 999 aa10.72□□□□□ -0.69
PRTG-203ENST00000559842 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
PRTG-203ENST00000559842 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
PRTG-203ENST00000559842 EEA1Q15075 1411 aa10.69□□□□□ -0.7
PRTG-203ENST00000559842 PDS5BQ9NTI5 1447 aa10.68□□□□□ -0.7
PRTG-203ENST00000559842 CUX1P39880 1505 aa10.67□□□□□ -0.7
PRTG-203ENST00000559842 NESP48681 1621 aa10.66□□□□□ -0.7
PRTG-203ENST00000559842 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
PRTG-203ENST00000559842 POTEHQ6S545 545 aa10.63□□□□□ -0.71
PRTG-203ENST00000559842 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
PRTG-203ENST00000559842 ATF5Q9Y2D1 282 aaPredicted RBP10.59□□□□□ -0.71
PRTG-203ENST00000559842 SOGA1O94964 1423 aa10.58□□□□□ -0.72
PRTG-203ENST00000559842 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
PRTG-203ENST00000559842 KIF21AQ7Z4S6 1674 aa10.58□□□□□ -0.72
PRTG-203ENST00000559842 TRHP20396 242 aaPredicted RBP10.58□□□□□ -0.72
PRTG-203ENST00000559842 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
PRTG-203ENST00000559842 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
PRTG-203ENST00000559842 KIF27Q86VH2 1401 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms