RNA–Protein interactions for RNA: ENST00000559251.1

AC009554.1-201, humanhuman

TSL 5 BASIC

Gene AC009554.1, Length 399 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009554.1-201ENST00000559251 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
AC009554.1-201ENST00000559251 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
AC009554.1-201ENST00000559251 SENP3Q9H4L4 574 aaPredicted RBP11.78□□□□□ -0.52
AC009554.1-201ENST00000559251 PHF23Q9BUL5 403 aaPredicted RBP11.53□□□□□ -0.56
AC009554.1-201ENST00000559251 NISCHQ9Y2I1 1504 aa11.38□□□□□ -0.59
AC009554.1-201ENST00000559251 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
AC009554.1-201ENST00000559251 FOXD1Q16676 465 aa10.82□□□□□ -0.68
AC009554.1-201ENST00000559251 PLPPR3Q6T4P5 718 aa10.66□□□□□ -0.7
AC009554.1-201ENST00000559251 MSH5O43196 834 aa10.25□□□□□ -0.77
AC009554.1-201ENST00000559251 PIAS4Q8N2W9 510 aaPredicted RBP10.22□□□□□ -0.77
AC009554.1-201ENST00000559251 ADRA2BP18089 450 aa10.14□□□□□ -0.79
AC009554.1-201ENST00000559251 PPP6R1Q9UPN7 881 aa10.13□□□□□ -0.79
AC009554.1-201ENST00000559251 CCDC180Q9P1Z9 1646 aa9.92□□□□□ -0.82
AC009554.1-201ENST00000559251 DCAF1Q9Y4B6 1507 aa9.62□□□□□ -0.87
AC009554.1-201ENST00000559251 ZCCHC6Q5VYS8 1495 aaKnown RBP9.58□□□□□ -0.88
AC009554.1-201ENST00000559251 MYO15BQ96JP2 1530 aa9.55□□□□□ -0.88
AC009554.1-201ENST00000559251 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
AC009554.1-201ENST00000559251 DMRT2Q9Y5R5 561 aa9.32□□□□□ -0.92
AC009554.1-201ENST00000559251 NACADO15069 1562 aa9.29□□□□□ -0.92
AC009554.1-201ENST00000559251 PPP4R3CPQ6ZMV5 832 aa9.28□□□□□ -0.92
AC009554.1-201ENST00000559251 MAPK8IP2Q13387 824 aaPredicted RBP9.22□□□□□ -0.93
AC009554.1-201ENST00000559251 CNKSR2Q8WXI2 1034 aa9.14□□□□□ -0.95
AC009554.1-201ENST00000559251 DCAF8L2P0C7V8 631 aa9.11□□□□□ -0.95
AC009554.1-201ENST00000559251 RB1CC1Q8TDY2 1594 aa9.11□□□□□ -0.95
AC009554.1-201ENST00000559251 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
AC009554.1-201ENST00000559251 ABCC9O60706 1549 aa9.05□□□□□ -0.96
AC009554.1-201ENST00000559251 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
AC009554.1-201ENST00000559251 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
AC009554.1-201ENST00000559251 SHROOM4Q9ULL8 1493 aa9□□□□□ -0.97
AC009554.1-201ENST00000559251 DCAF8L1A6NGE4 600 aa8.88□□□□□ -0.99
AC009554.1-201ENST00000559251 SCRIBQ14160 1630 aa8.84□□□□□ -0.99
AC009554.1-201ENST00000559251 RSF1Q96T23 1441 aaPredicted RBP8.83□□□□□ -1
AC009554.1-201ENST00000559251 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
AC009554.1-201ENST00000559251 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
AC009554.1-201ENST00000559251 CACNB1Q02641 598 aaPredicted RBP8.81□□□□□ -1
AC009554.1-201ENST00000559251 DNAJC5BQ9UF47 199 aa8.81□□□□□ -1
AC009554.1-201ENST00000559251 SUPT5HO00267 1087 aaKnown RBP8.79□□□□□ -1
AC009554.1-201ENST00000559251 KCNA4P22459 653 aa8.73□□□□□ -1.01
AC009554.1-201ENST00000559251 PEG3Q9GZU2 1588 aa8.72□□□□□ -1.01
AC009554.1-201ENST00000559251 BICRAQ9NZM4 1560 aa8.7□□□□□ -1.02
AC009554.1-201ENST00000559251 CECR2Q9BXF3 1484 aa8.67□□□□□ -1.02
AC009554.1-201ENST00000559251 RNF39Q9H2S5 420 aa8.67□□□□□ -1.02
AC009554.1-201ENST00000559251 MROH2BQ7Z745 1585 aa8.66□□□□□ -1.02
AC009554.1-201ENST00000559251 UNC13AQ9UPW8 1703 aa8.65□□□□□ -1.03
AC009554.1-201ENST00000559251 SMARCA4P51532 1647 aa8.65□□□□□ -1.03
AC009554.1-201ENST00000559251 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
AC009554.1-201ENST00000559251 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
AC009554.1-201ENST00000559251 TOP2AP11388 1531 aaKnown RBP8.61□□□□□ -1.03
AC009554.1-201ENST00000559251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.03
AC009554.1-201ENST00000559251 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
AC009554.1-201ENST00000559251 ATAD2BQ9ULI0 1458 aa8.56□□□□□ -1.04
AC009554.1-201ENST00000559251 POTEHQ6S545 545 aa8.55□□□□□ -1.04
AC009554.1-201ENST00000559251 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
AC009554.1-201ENST00000559251 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC009554.1-201ENST00000559251 WIZO95785 1651 aa8.5□□□□□ -1.05
AC009554.1-201ENST00000559251 CCDC88BA6NC98 1476 aa8.48□□□□□ -1.05
AC009554.1-201ENST00000559251 BAZ1BQ9UIG0 1483 aaKnown RBP8.48□□□□□ -1.05
AC009554.1-201ENST00000559251 EIF4G1Q04637 1599 aaKnown RBP8.47□□□□□ -1.05
AC009554.1-201ENST00000559251 EEA1Q15075 1411 aa8.45□□□□□ -1.06
AC009554.1-201ENST00000559251 TRIM41Q8WV44 630 aa8.43□□□□□ -1.06
AC009554.1-201ENST00000559251 APLP2Q06481 763 aa8.42□□□□□ -1.06
AC009554.1-201ENST00000559251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
AC009554.1-201ENST00000559251 HNRNPUL2Q1KMD3 747 aaKnown RBP8.39□□□□□ -1.07
AC009554.1-201ENST00000559251 U3KPZ7 1027 aaPredicted RBP8.39□□□□□ -1.07
AC009554.1-201ENST00000559251 CFTRP13569 1480 aa8.37□□□□□ -1.07
AC009554.1-201ENST00000559251 SLC4A1APQ9BWU0 796 aaKnown RBP8.35□□□□□ -1.07
AC009554.1-201ENST00000559251 SLC4A2P04920 1241 aa8.34□□□□□ -1.07
AC009554.1-201ENST00000559251 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
AC009554.1-201ENST00000559251 CADPSQ9ULU8 1353 aa8.33□□□□□ -1.08
AC009554.1-201ENST00000559251 WRNQ14191 1432 aaPredicted RBP eCLIP8.32□□□□□ -1.08
AC009554.1-201ENST00000559251 SAMD1Q6SPF0 538 aaPredicted RBP8.3□□□□□ -1.08
AC009554.1-201ENST00000559251 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
AC009554.1-201ENST00000559251 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
AC009554.1-201ENST00000559251 CC2D2AQ9P2K1 1620 aa8.26□□□□□ -1.09
AC009554.1-201ENST00000559251 MYCNP04198 464 aaPredicted RBP8.26□□□□□ -1.09
AC009554.1-201ENST00000559251 CAPN15O75808 1086 aa8.24□□□□□ -1.09
AC009554.1-201ENST00000559251 CSRNP3Q8WYN3 585 aa8.24□□□□□ -1.09
AC009554.1-201ENST00000559251 TOP2BQ02880 1626 aa8.23□□□□□ -1.09
AC009554.1-201ENST00000559251 ZNF219Q9P2Y4 722 aaPredicted RBP8.23□□□□□ -1.09
AC009554.1-201ENST00000559251 FOXD4L1Q9NU39 408 aa8.22□□□□□ -1.09
AC009554.1-201ENST00000559251 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
AC009554.1-201ENST00000559251 TNIKQ9UKE5 1360 aa8.21□□□□□ -1.1
AC009554.1-201ENST00000559251 PDS5BQ9NTI5 1447 aa8.2□□□□□ -1.1
AC009554.1-201ENST00000559251 BIVM-ERCC5R4GMW8 1640 aa8.19□□□□□ -1.1
AC009554.1-201ENST00000559251 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
AC009554.1-201ENST00000559251 CEP164Q9UPV0 1460 aa8.18□□□□□ -1.1
AC009554.1-201ENST00000559251 SPINK5Q9NQ38 1064 aaPredicted RBP8.17□□□□□ -1.1
AC009554.1-201ENST00000559251 KIF27Q86VH2 1401 aa8.16□□□□□ -1.1
AC009554.1-201ENST00000559251 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
AC009554.1-201ENST00000559251 GOLGA3Q08378 1498 aa8.14□□□□□ -1.11
AC009554.1-201ENST00000559251 KIF21BO75037 1637 aa8.14□□□□□ -1.11
AC009554.1-201ENST00000559251 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
AC009554.1-201ENST00000559251 DSG3P32926 999 aa8.13□□□□□ -1.11
AC009554.1-201ENST00000559251 SYNJ1O43426 1573 aa8.12□□□□□ -1.11
AC009554.1-201ENST00000559251 PRXQ9BXM0 1461 aa8.12□□□□□ -1.11
AC009554.1-201ENST00000559251 LOC105371045A0A1W2PR82 267 aa8.11□□□□□ -1.11
AC009554.1-201ENST00000559251 CUX1P39880 1505 aa8.11□□□□□ -1.11
AC009554.1-201ENST00000559251 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
AC009554.1-201ENST00000559251 SOGA1O94964 1423 aa8.1□□□□□ -1.11
AC009554.1-201ENST00000559251 DNMBPQ6XZF7 1577 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms