RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
IDH3A-206ENST00000558535 MYT1Q01538 1121 aa12□□□□□ -0.49
IDH3A-206ENST00000558535 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
IDH3A-206ENST00000558535 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
IDH3A-206ENST00000558535 ABCC9O60706 1549 aa11.7□□□□□ -0.54
IDH3A-206ENST00000558535 TTBK1Q5TCY1 1321 aaPredicted RBP11.64□□□□□ -0.55
IDH3A-206ENST00000558535 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
IDH3A-206ENST00000558535 NACADO15069 1562 aa11.28□□□□□ -0.6
IDH3A-206ENST00000558535 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
IDH3A-206ENST00000558535 DCAF1Q9Y4B6 1507 aa11.07□□□□□ -0.64
IDH3A-206ENST00000558535 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
IDH3A-206ENST00000558535 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
IDH3A-206ENST00000558535 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
IDH3A-206ENST00000558535 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
IDH3A-206ENST00000558535 ERICH6Q7L0X2 663 aa10.9□□□□□ -0.66
IDH3A-206ENST00000558535 BICRAQ9NZM4 1560 aa10.89□□□□□ -0.67
IDH3A-206ENST00000558535 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
IDH3A-206ENST00000558535 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
IDH3A-206ENST00000558535 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
IDH3A-206ENST00000558535 CHIC1Q5VXU3 224 aa10.74□□□□□ -0.69
IDH3A-206ENST00000558535 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
IDH3A-206ENST00000558535 APLP2Q06481 763 aa10.69□□□□□ -0.7
IDH3A-206ENST00000558535 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.71
IDH3A-206ENST00000558535 HRCP23327 699 aa10.64□□□□□ -0.71
IDH3A-206ENST00000558535 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
IDH3A-206ENST00000558535 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
IDH3A-206ENST00000558535 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
IDH3A-206ENST00000558535 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
IDH3A-206ENST00000558535 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
IDH3A-206ENST00000558535 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
IDH3A-206ENST00000558535 HMGXB3Q12766 1538 aa10.34□□□□□ -0.75
IDH3A-206ENST00000558535 BCL11AQ9H165 835 aa10.32□□□□□ -0.76
IDH3A-206ENST00000558535 BAZ1AQ9NRL2 1556 aaPredicted RBP10.32□□□□□ -0.76
IDH3A-206ENST00000558535 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
IDH3A-206ENST00000558535 AEBP2Q6ZN18 517 aaPredicted RBP10.31□□□□□ -0.76
IDH3A-206ENST00000558535 SMARCA4P51532 1647 aa10.31□□□□□ -0.76
IDH3A-206ENST00000558535 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
IDH3A-206ENST00000558535 CENPBP07199 599 aaPredicted RBP10.28□□□□□ -0.76
IDH3A-206ENST00000558535 SCAF1Q9H7N4 1312 aaKnown RBP10.26□□□□□ -0.77
IDH3A-206ENST00000558535 CUX2O14529 1486 aa10.23□□□□□ -0.77
IDH3A-206ENST00000558535 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
IDH3A-206ENST00000558535 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
IDH3A-206ENST00000558535 LAMC3Q9Y6N6 1575 aa10.15□□□□□ -0.79
IDH3A-206ENST00000558535 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
IDH3A-206ENST00000558535 PDS5BQ9NTI5 1447 aa10.09□□□□□ -0.79
IDH3A-206ENST00000558535 ZEB1P37275 1124 aaPredicted RBP10.09□□□□□ -0.79
IDH3A-206ENST00000558535 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
IDH3A-206ENST00000558535 FAM9AQ8IZU1 332 aaPredicted RBP10.06□□□□□ -0.8
IDH3A-206ENST00000558535 CADPSQ9ULU8 1353 aa10.05□□□□□ -0.8
IDH3A-206ENST00000558535 NESP48681 1621 aa10.04□□□□□ -0.8
IDH3A-206ENST00000558535 THOC2Q8NI27 1593 aaKnown RBP10.02□□□□□ -0.8
IDH3A-206ENST00000558535 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
IDH3A-206ENST00000558535 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
IDH3A-206ENST00000558535 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
IDH3A-206ENST00000558535 WIZO95785 1651 aa9.98□□□□□ -0.81
IDH3A-206ENST00000558535 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
IDH3A-206ENST00000558535 EIF5BO60841 1220 aaKnown RBP9.97□□□□□ -0.81
IDH3A-206ENST00000558535 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.81
IDH3A-206ENST00000558535 CFTRP13569 1480 aa9.96□□□□□ -0.82
IDH3A-206ENST00000558535 ANP32EQ9BTT0 268 aa9.95□□□□□ -0.82
IDH3A-206ENST00000558535 WDR62O43379 1518 aa9.95□□□□□ -0.82
IDH3A-206ENST00000558535 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
IDH3A-206ENST00000558535 CEP164Q9UPV0 1460 aa9.93□□□□□ -0.82
IDH3A-206ENST00000558535 FANCD2Q9BXW9 1451 aa9.9□□□□□ -0.82
IDH3A-206ENST00000558535 CLSPNQ9HAW4 1339 aa9.85□□□□□ -0.83
IDH3A-206ENST00000558535 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
IDH3A-206ENST00000558535 UBE2Q2Q8WVN8 375 aa9.83□□□□□ -0.84
IDH3A-206ENST00000558535 MYT1LQ9UL68 1186 aa9.83□□□□□ -0.84
IDH3A-206ENST00000558535 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
IDH3A-206ENST00000558535 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
IDH3A-206ENST00000558535 CCDC88BA6NC98 1476 aa9.81□□□□□ -0.84
IDH3A-206ENST00000558535 URB2Q14146 1524 aaKnown RBP9.79□□□□□ -0.84
IDH3A-206ENST00000558535 IFT140Q96RY7 1462 aa9.77□□□□□ -0.85
IDH3A-206ENST00000558535 PHF23Q9BUL5 403 aaPredicted RBP9.77□□□□□ -0.85
IDH3A-206ENST00000558535 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
IDH3A-206ENST00000558535 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
IDH3A-206ENST00000558535 DNMBPQ6XZF7 1577 aa9.72□□□□□ -0.85
IDH3A-206ENST00000558535 TOPBP1Q92547 1522 aa9.72□□□□□ -0.85
IDH3A-206ENST00000558535 PCGF6Q9BYE7 350 aa9.7□□□□□ -0.86
IDH3A-206ENST00000558535 OSCARQ8IYS5 282 aa9.7□□□□□ -0.86
IDH3A-206ENST00000558535 NEUROD1Q13562 356 aa9.69□□□□□ -0.86
IDH3A-206ENST00000558535 WDR97A6NE52 1622 aa9.69□□□□□ -0.86
IDH3A-206ENST00000558535 RANGAP1P46060 587 aaPredicted RBP9.62□□□□□ -0.87
IDH3A-206ENST00000558535 TARBP1Q13395 1621 aaKnown RBP9.62□□□□□ -0.87
IDH3A-206ENST00000558535 NCBP3Q53F19 620 aaKnown RBP9.62□□□□□ -0.87
IDH3A-206ENST00000558535 POLA1P09884 1462 aaPredicted RBP9.61□□□□□ -0.87
IDH3A-206ENST00000558535 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
IDH3A-206ENST00000558535 EIF4G3O43432 1585 aaKnown RBP9.61□□□□□ -0.87
IDH3A-206ENST00000558535 ARXQ96QS3 562 aa9.6□□□□□ -0.87
IDH3A-206ENST00000558535 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
IDH3A-206ENST00000558535 SOGA1O94964 1423 aa9.58□□□□□ -0.88
IDH3A-206ENST00000558535 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
IDH3A-206ENST00000558535 PLPPR3Q6T4P5 718 aa9.58□□□□□ -0.88
IDH3A-206ENST00000558535 MAGI1Q96QZ7 1491 aaPredicted RBP9.56□□□□□ -0.88
IDH3A-206ENST00000558535 FGD5Q6ZNL6 1462 aa9.55□□□□□ -0.88
IDH3A-206ENST00000558535 CUX1P39880 1505 aa9.54□□□□□ -0.88
IDH3A-206ENST00000558535 AQRO60306 1485 aaKnown RBP eCLIP9.54□□□□□ -0.882e-6■■■■■ 26.9
IDH3A-206ENST00000558535 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
IDH3A-206ENST00000558535 TRIM41Q8WV44 630 aa9.52□□□□□ -0.89
IDH3A-206ENST00000558535 ARHGEF11O15085 1522 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms