RNA–Protein interactions for RNA: ENST00000557070.1

LINC02296-201, Transcript of long intergenic non-protein coding RNA 2296, humanhuman

TSL 4 BASIC

Gene LINC02296, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02296-201ENST00000557070 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
LINC02296-201ENST00000557070 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
LINC02296-201ENST00000557070 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
LINC02296-201ENST00000557070 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
LINC02296-201ENST00000557070 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
LINC02296-201ENST00000557070 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
LINC02296-201ENST00000557070 FOXD1Q16676 465 aa21.37■■□□□ 1.01
LINC02296-201ENST00000557070 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
LINC02296-201ENST00000557070 ADRA2BP18089 450 aa20.67■□□□□ 0.9
LINC02296-201ENST00000557070 ABCC9O60706 1549 aa20.22■□□□□ 0.83
LINC02296-201ENST00000557070 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
LINC02296-201ENST00000557070 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
LINC02296-201ENST00000557070 MSH5O43196 834 aa19.49■□□□□ 0.71
LINC02296-201ENST00000557070 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
LINC02296-201ENST00000557070 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
LINC02296-201ENST00000557070 PPP4R3CPQ6ZMV5 832 aa19.04■□□□□ 0.64
LINC02296-201ENST00000557070 NACADO15069 1562 aa18.86■□□□□ 0.61
LINC02296-201ENST00000557070 KCNA4P22459 653 aa18.78■□□□□ 0.6
LINC02296-201ENST00000557070 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
LINC02296-201ENST00000557070 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
LINC02296-201ENST00000557070 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
LINC02296-201ENST00000557070 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.57
LINC02296-201ENST00000557070 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
LINC02296-201ENST00000557070 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
LINC02296-201ENST00000557070 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
LINC02296-201ENST00000557070 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
LINC02296-201ENST00000557070 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
LINC02296-201ENST00000557070 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
LINC02296-201ENST00000557070 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
LINC02296-201ENST00000557070 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
LINC02296-201ENST00000557070 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
LINC02296-201ENST00000557070 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
LINC02296-201ENST00000557070 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
LINC02296-201ENST00000557070 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
LINC02296-201ENST00000557070 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
LINC02296-201ENST00000557070 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
LINC02296-201ENST00000557070 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
LINC02296-201ENST00000557070 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
LINC02296-201ENST00000557070 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
LINC02296-201ENST00000557070 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
LINC02296-201ENST00000557070 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
LINC02296-201ENST00000557070 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
LINC02296-201ENST00000557070 CUX2O14529 1486 aa17.55■□□□□ 0.4
LINC02296-201ENST00000557070 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
LINC02296-201ENST00000557070 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
LINC02296-201ENST00000557070 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
LINC02296-201ENST00000557070 ZBTB22O15209 634 aa17.35■□□□□ 0.37
LINC02296-201ENST00000557070 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
LINC02296-201ENST00000557070 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
LINC02296-201ENST00000557070 NESP48681 1621 aa17.32■□□□□ 0.36
LINC02296-201ENST00000557070 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
LINC02296-201ENST00000557070 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
LINC02296-201ENST00000557070 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
LINC02296-201ENST00000557070 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
LINC02296-201ENST00000557070 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
LINC02296-201ENST00000557070 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
LINC02296-201ENST00000557070 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
LINC02296-201ENST00000557070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC02296-201ENST00000557070 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
LINC02296-201ENST00000557070 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
LINC02296-201ENST00000557070 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.32
LINC02296-201ENST00000557070 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
LINC02296-201ENST00000557070 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
LINC02296-201ENST00000557070 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
LINC02296-201ENST00000557070 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
LINC02296-201ENST00000557070 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
LINC02296-201ENST00000557070 WDR62O43379 1518 aa16.88■□□□□ 0.29
LINC02296-201ENST00000557070 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
LINC02296-201ENST00000557070 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
LINC02296-201ENST00000557070 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
LINC02296-201ENST00000557070 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
LINC02296-201ENST00000557070 WIZO95785 1651 aa16.76■□□□□ 0.27
LINC02296-201ENST00000557070 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
LINC02296-201ENST00000557070 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
LINC02296-201ENST00000557070 CFTRP13569 1480 aa16.62■□□□□ 0.25
LINC02296-201ENST00000557070 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
LINC02296-201ENST00000557070 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
LINC02296-201ENST00000557070 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
LINC02296-201ENST00000557070 RIMBP3CA6NJZ7 1639 aa16.57■□□□□ 0.24
LINC02296-201ENST00000557070 RIMBP3BA6NNM3 1639 aa16.57■□□□□ 0.24
LINC02296-201ENST00000557070 RIMBP3Q9UFD9 1639 aa16.57■□□□□ 0.24
LINC02296-201ENST00000557070 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
LINC02296-201ENST00000557070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
LINC02296-201ENST00000557070 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
LINC02296-201ENST00000557070 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
LINC02296-201ENST00000557070 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
LINC02296-201ENST00000557070 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
LINC02296-201ENST00000557070 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
LINC02296-201ENST00000557070 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
LINC02296-201ENST00000557070 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
LINC02296-201ENST00000557070 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
LINC02296-201ENST00000557070 ATXN8OSP0DMR3 200 aa16.45■□□□□ 0.22
LINC02296-201ENST00000557070 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
LINC02296-201ENST00000557070 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
LINC02296-201ENST00000557070 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
LINC02296-201ENST00000557070 CHD1O14646 1710 aa16.32■□□□□ 0.2
LINC02296-201ENST00000557070 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
LINC02296-201ENST00000557070 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
LINC02296-201ENST00000557070 CAPN15O75808 1086 aa16.29■□□□□ 0.2
LINC02296-201ENST00000557070 CYB5RLQ6IPT4 315 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms