RNA–Protein interactions for RNA: ENST00000556189.5

NRDE2-205, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 2,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-205ENST00000556189 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
NRDE2-205ENST00000556189 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
NRDE2-205ENST00000556189 SHROOM4Q9ULL8 1493 aa19.74■□□□□ 0.75
NRDE2-205ENST00000556189 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
NRDE2-205ENST00000556189 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
NRDE2-205ENST00000556189 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
NRDE2-205ENST00000556189 HRCP23327 699 aa18.98■□□□□ 0.63
NRDE2-205ENST00000556189 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
NRDE2-205ENST00000556189 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
NRDE2-205ENST00000556189 ABCC9O60706 1549 aa18.87■□□□□ 0.61
NRDE2-205ENST00000556189 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
NRDE2-205ENST00000556189 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
NRDE2-205ENST00000556189 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
NRDE2-205ENST00000556189 NACADO15069 1562 aa18.43■□□□□ 0.54
NRDE2-205ENST00000556189 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
NRDE2-205ENST00000556189 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
NRDE2-205ENST00000556189 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
NRDE2-205ENST00000556189 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
NRDE2-205ENST00000556189 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
NRDE2-205ENST00000556189 TRIM26Q12899 539 aaPredicted RBP18.05■□□□□ 0.48
NRDE2-205ENST00000556189 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
NRDE2-205ENST00000556189 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
NRDE2-205ENST00000556189 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
NRDE2-205ENST00000556189 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
NRDE2-205ENST00000556189 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
NRDE2-205ENST00000556189 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.45
NRDE2-205ENST00000556189 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
NRDE2-205ENST00000556189 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
NRDE2-205ENST00000556189 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
NRDE2-205ENST00000556189 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
NRDE2-205ENST00000556189 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
NRDE2-205ENST00000556189 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
NRDE2-205ENST00000556189 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
NRDE2-205ENST00000556189 WIZO95785 1651 aa17.57■□□□□ 0.4
NRDE2-205ENST00000556189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
NRDE2-205ENST00000556189 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
NRDE2-205ENST00000556189 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
NRDE2-205ENST00000556189 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
NRDE2-205ENST00000556189 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
NRDE2-205ENST00000556189 MYT1Q01538 1121 aa17.41■□□□□ 0.38
NRDE2-205ENST00000556189 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
NRDE2-205ENST00000556189 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
NRDE2-205ENST00000556189 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
NRDE2-205ENST00000556189 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
NRDE2-205ENST00000556189 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.35
NRDE2-205ENST00000556189 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
NRDE2-205ENST00000556189 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
NRDE2-205ENST00000556189 RANGAP1P46060 587 aaPredicted RBP17.21■□□□□ 0.35
NRDE2-205ENST00000556189 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
NRDE2-205ENST00000556189 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
NRDE2-205ENST00000556189 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
NRDE2-205ENST00000556189 NCAPD3P42695 1498 aa17.06■□□□□ 0.32
NRDE2-205ENST00000556189 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
NRDE2-205ENST00000556189 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
NRDE2-205ENST00000556189 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
NRDE2-205ENST00000556189 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
NRDE2-205ENST00000556189 MIER1Q8N108 512 aa16.97■□□□□ 0.31
NRDE2-205ENST00000556189 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.3
NRDE2-205ENST00000556189 SOGA1O94964 1423 aa16.92■□□□□ 0.3
NRDE2-205ENST00000556189 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
NRDE2-205ENST00000556189 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
NRDE2-205ENST00000556189 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
NRDE2-205ENST00000556189 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
NRDE2-205ENST00000556189 CFTRP13569 1480 aa16.72■□□□□ 0.27
NRDE2-205ENST00000556189 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
NRDE2-205ENST00000556189 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
NRDE2-205ENST00000556189 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
NRDE2-205ENST00000556189 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
NRDE2-205ENST00000556189 NESP48681 1621 aa16.61■□□□□ 0.25
NRDE2-205ENST00000556189 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
NRDE2-205ENST00000556189 BCANQ96GW7 911 aa16.57■□□□□ 0.24
NRDE2-205ENST00000556189 CUX1P39880 1505 aa16.55■□□□□ 0.24
NRDE2-205ENST00000556189 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
NRDE2-205ENST00000556189 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
NRDE2-205ENST00000556189 ITGAEP38570 1179 aa16.51■□□□□ 0.23
NRDE2-205ENST00000556189 TSHZ2Q9NRE2 1034 aa16.51■□□□□ 0.23
NRDE2-205ENST00000556189 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
NRDE2-205ENST00000556189 APLP2Q06481 763 aa16.49■□□□□ 0.23
NRDE2-205ENST00000556189 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
NRDE2-205ENST00000556189 TNIKQ9UKE5 1360 aa16.48■□□□□ 0.23
NRDE2-205ENST00000556189 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
NRDE2-205ENST00000556189 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
NRDE2-205ENST00000556189 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
NRDE2-205ENST00000556189 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
NRDE2-205ENST00000556189 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
NRDE2-205ENST00000556189 CLIP1P30622 1438 aa16.39■□□□□ 0.21
NRDE2-205ENST00000556189 EEA1Q15075 1411 aa16.38■□□□□ 0.21
NRDE2-205ENST00000556189 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
NRDE2-205ENST00000556189 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
NRDE2-205ENST00000556189 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
NRDE2-205ENST00000556189 P3H3Q8IVL6 736 aa16.35■□□□□ 0.21
NRDE2-205ENST00000556189 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
NRDE2-205ENST00000556189 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
NRDE2-205ENST00000556189 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
NRDE2-205ENST00000556189 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
NRDE2-205ENST00000556189 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
NRDE2-205ENST00000556189 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
NRDE2-205ENST00000556189 FKBP8Q14318 412 aa16.31■□□□□ 0.2
NRDE2-205ENST00000556189 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
NRDE2-205ENST00000556189 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms