RNA–Protein interactions for RNA: ENST00000553833.5

COCH-207, Transcript of cochlin, humanhuman

TSL 5

Gene COCH, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-207ENST00000553833 AEBP2Q6ZN18 517 aaPredicted RBP22.1■■□□□ 1.13
COCH-207ENST00000553833 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
COCH-207ENST00000553833 NISCHQ9Y2I1 1504 aa19.18■□□□□ 0.66
COCH-207ENST00000553833 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
COCH-207ENST00000553833 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
COCH-207ENST00000553833 FOXD1Q16676 465 aa17.63■□□□□ 0.41
COCH-207ENST00000553833 ABCC9O60706 1549 aa17.49■□□□□ 0.39
COCH-207ENST00000553833 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
COCH-207ENST00000553833 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
COCH-207ENST00000553833 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
COCH-207ENST00000553833 MSH5O43196 834 aa16.63■□□□□ 0.25
COCH-207ENST00000553833 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
COCH-207ENST00000553833 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
COCH-207ENST00000553833 NACADO15069 1562 aa16.4■□□□□ 0.22
COCH-207ENST00000553833 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
COCH-207ENST00000553833 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
COCH-207ENST00000553833 ADRA2BP18089 450 aa16.27■□□□□ 0.2
COCH-207ENST00000553833 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
COCH-207ENST00000553833 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
COCH-207ENST00000553833 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
COCH-207ENST00000553833 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
COCH-207ENST00000553833 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
COCH-207ENST00000553833 SHROOM4Q9ULL8 1493 aa15.89■□□□□ 0.13
COCH-207ENST00000553833 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
COCH-207ENST00000553833 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
COCH-207ENST00000553833 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
COCH-207ENST00000553833 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
COCH-207ENST00000553833 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
COCH-207ENST00000553833 SCRIBQ14160 1630 aa15.71■□□□□ 0.11
COCH-207ENST00000553833 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
COCH-207ENST00000553833 CUX2O14529 1486 aa15.2■□□□□ 0.02
COCH-207ENST00000553833 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
COCH-207ENST00000553833 ATAD2BQ9ULI0 1458 aa15.09■□□□□ 0.01
COCH-207ENST00000553833 ERCC6Q03468 1493 aa15.08■□□□□ 0
COCH-207ENST00000553833 HMGXB3Q12766 1538 aa15.03■□□□□ -0
COCH-207ENST00000553833 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
COCH-207ENST00000553833 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
COCH-207ENST00000553833 SMARCA2P51531 1590 aa15□□□□□ -0.01
COCH-207ENST00000553833 NESP48681 1621 aa14.99□□□□□ -0.01
COCH-207ENST00000553833 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
COCH-207ENST00000553833 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
COCH-207ENST00000553833 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
COCH-207ENST00000553833 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
COCH-207ENST00000553833 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
COCH-207ENST00000553833 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
COCH-207ENST00000553833 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
COCH-207ENST00000553833 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
COCH-207ENST00000553833 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
COCH-207ENST00000553833 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
COCH-207ENST00000553833 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
COCH-207ENST00000553833 WDR62O43379 1518 aa14.64□□□□□ -0.07
COCH-207ENST00000553833 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
COCH-207ENST00000553833 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
COCH-207ENST00000553833 WIZO95785 1651 aa14.56□□□□□ -0.08
COCH-207ENST00000553833 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
COCH-207ENST00000553833 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
COCH-207ENST00000553833 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
COCH-207ENST00000553833 CFTRP13569 1480 aa14.49□□□□□ -0.09
COCH-207ENST00000553833 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
COCH-207ENST00000553833 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
COCH-207ENST00000553833 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
COCH-207ENST00000553833 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
COCH-207ENST00000553833 TOP2AP11388 1531 aaKnown RBP14.37□□□□□ -0.11
COCH-207ENST00000553833 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
COCH-207ENST00000553833 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
COCH-207ENST00000553833 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
COCH-207ENST00000553833 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
COCH-207ENST00000553833 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
COCH-207ENST00000553833 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
COCH-207ENST00000553833 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
COCH-207ENST00000553833 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
COCH-207ENST00000553833 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
COCH-207ENST00000553833 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
COCH-207ENST00000553833 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
COCH-207ENST00000553833 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
COCH-207ENST00000553833 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
COCH-207ENST00000553833 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
COCH-207ENST00000553833 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
COCH-207ENST00000553833 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
COCH-207ENST00000553833 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
COCH-207ENST00000553833 TARBP1Q13395 1621 aaKnown RBP14.13□□□□□ -0.15
COCH-207ENST00000553833 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
COCH-207ENST00000553833 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
COCH-207ENST00000553833 ARAP1Q96P48 1450 aa14.1□□□□□ -0.15
COCH-207ENST00000553833 CHD1O14646 1710 aa14.1□□□□□ -0.15
COCH-207ENST00000553833 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
COCH-207ENST00000553833 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
COCH-207ENST00000553833 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
COCH-207ENST00000553833 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
COCH-207ENST00000553833 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
COCH-207ENST00000553833 CLASP1Q7Z460 1538 aa13.98□□□□□ -0.17
COCH-207ENST00000553833 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
COCH-207ENST00000553833 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
COCH-207ENST00000553833 FBLN2P98095 1184 aa13.96□□□□□ -0.17
COCH-207ENST00000553833 SOGA1O94964 1423 aa13.96□□□□□ -0.18
COCH-207ENST00000553833 SNAPC4Q5SXM2 1469 aa13.94□□□□□ -0.18
COCH-207ENST00000553833 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
COCH-207ENST00000553833 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
COCH-207ENST00000553833 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
COCH-207ENST00000553833 CUX1P39880 1505 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms