RNA–Protein interactions for RNA: ENST00000553113.5

PPP1R1A-204, Transcript of protein phosphatase 1 regulatory inhibitor subunit 1A, humanhuman

TSL 3

Gene PPP1R1A, Length 547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R1A-204ENST00000553113 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.89
PPP1R1A-204ENST00000553113 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
PPP1R1A-204ENST00000553113 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
PPP1R1A-204ENST00000553113 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
PPP1R1A-204ENST00000553113 FOXD1Q16676 465 aa16.43■□□□□ 0.22
PPP1R1A-204ENST00000553113 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
PPP1R1A-204ENST00000553113 MSH5O43196 834 aa15.48■□□□□ 0.07
PPP1R1A-204ENST00000553113 PIAS4Q8N2W9 510 aaPredicted RBP15.27■□□□□ 0.04
PPP1R1A-204ENST00000553113 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
PPP1R1A-204ENST00000553113 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
PPP1R1A-204ENST00000553113 ADRA2BP18089 450 aa15.07■□□□□ 0
PPP1R1A-204ENST00000553113 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
PPP1R1A-204ENST00000553113 NISCHQ9Y2I1 1504 aa14.83□□□□□ -0.04
PPP1R1A-204ENST00000553113 ABCC9O60706 1549 aa14.7□□□□□ -0.06
PPP1R1A-204ENST00000553113 DNAJC5Q9H3Z4 198 aa14.36□□□□□ -0.11
PPP1R1A-204ENST00000553113 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
PPP1R1A-204ENST00000553113 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
PPP1R1A-204ENST00000553113 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.21
PPP1R1A-204ENST00000553113 CCDC180Q9P1Z9 1646 aa13.7□□□□□ -0.22
PPP1R1A-204ENST00000553113 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
PPP1R1A-204ENST00000553113 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
PPP1R1A-204ENST00000553113 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
PPP1R1A-204ENST00000553113 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
PPP1R1A-204ENST00000553113 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
PPP1R1A-204ENST00000553113 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
PPP1R1A-204ENST00000553113 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
PPP1R1A-204ENST00000553113 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
PPP1R1A-204ENST00000553113 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
PPP1R1A-204ENST00000553113 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
PPP1R1A-204ENST00000553113 NACADO15069 1562 aa13.23□□□□□ -0.29
PPP1R1A-204ENST00000553113 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
PPP1R1A-204ENST00000553113 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
PPP1R1A-204ENST00000553113 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
PPP1R1A-204ENST00000553113 CUX2O14529 1486 aa13.11□□□□□ -0.31
PPP1R1A-204ENST00000553113 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
PPP1R1A-204ENST00000553113 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
PPP1R1A-204ENST00000553113 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
PPP1R1A-204ENST00000553113 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
PPP1R1A-204ENST00000553113 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
PPP1R1A-204ENST00000553113 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
PPP1R1A-204ENST00000553113 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
PPP1R1A-204ENST00000553113 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
PPP1R1A-204ENST00000553113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
PPP1R1A-204ENST00000553113 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
PPP1R1A-204ENST00000553113 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
PPP1R1A-204ENST00000553113 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
PPP1R1A-204ENST00000553113 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
PPP1R1A-204ENST00000553113 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
PPP1R1A-204ENST00000553113 NESP48681 1621 aa12.37□□□□□ -0.43
PPP1R1A-204ENST00000553113 U3KPZ7 1027 aaPredicted RBP12.36□□□□□ -0.43
PPP1R1A-204ENST00000553113 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
PPP1R1A-204ENST00000553113 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.44
PPP1R1A-204ENST00000553113 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.44
PPP1R1A-204ENST00000553113 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.44
PPP1R1A-204ENST00000553113 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
PPP1R1A-204ENST00000553113 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
PPP1R1A-204ENST00000553113 DSG3P32926 999 aa12.26□□□□□ -0.45
PPP1R1A-204ENST00000553113 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
PPP1R1A-204ENST00000553113 CAPN15O75808 1086 aa12.24□□□□□ -0.45
PPP1R1A-204ENST00000553113 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
PPP1R1A-204ENST00000553113 POTEHQ6S545 545 aa12.18□□□□□ -0.46
PPP1R1A-204ENST00000553113 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
PPP1R1A-204ENST00000553113 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
PPP1R1A-204ENST00000553113 ARHGEF11O15085 1522 aa12.14□□□□□ -0.47
PPP1R1A-204ENST00000553113 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
PPP1R1A-204ENST00000553113 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
PPP1R1A-204ENST00000553113 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
PPP1R1A-204ENST00000553113 ATAD2BQ9ULI0 1458 aa12.07□□□□□ -0.48
PPP1R1A-204ENST00000553113 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
PPP1R1A-204ENST00000553113 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
PPP1R1A-204ENST00000553113 KCNA4P22459 653 aa12.04□□□□□ -0.48
PPP1R1A-204ENST00000553113 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
PPP1R1A-204ENST00000553113 WDR62O43379 1518 aa12.02□□□□□ -0.48
PPP1R1A-204ENST00000553113 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
PPP1R1A-204ENST00000553113 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
PPP1R1A-204ENST00000553113 APLP2Q06481 763 aa11.95□□□□□ -0.5
PPP1R1A-204ENST00000553113 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
PPP1R1A-204ENST00000553113 ABCB7O75027 752 aa11.92□□□□□ -0.5
PPP1R1A-204ENST00000553113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
PPP1R1A-204ENST00000553113 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
PPP1R1A-204ENST00000553113 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
PPP1R1A-204ENST00000553113 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
PPP1R1A-204ENST00000553113 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
PPP1R1A-204ENST00000553113 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.53
PPP1R1A-204ENST00000553113 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.53
PPP1R1A-204ENST00000553113 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
PPP1R1A-204ENST00000553113 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
PPP1R1A-204ENST00000553113 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
PPP1R1A-204ENST00000553113 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
PPP1R1A-204ENST00000553113 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
PPP1R1A-204ENST00000553113 SOCS7O14512 581 aa11.68□□□□□ -0.54
PPP1R1A-204ENST00000553113 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
PPP1R1A-204ENST00000553113 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.54
PPP1R1A-204ENST00000553113 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
PPP1R1A-204ENST00000553113 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
PPP1R1A-204ENST00000553113 CHD1O14646 1710 aa11.61□□□□□ -0.55
PPP1R1A-204ENST00000553113 ERCC6L2Q5T890 1561 aa11.6□□□□□ -0.55
PPP1R1A-204ENST00000553113 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
PPP1R1A-204ENST00000553113 POLA2Q14181 598 aa11.58□□□□□ -0.56
PPP1R1A-204ENST00000553113 ILDR2Q71H61 639 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms