RNA–Protein interactions for RNA: ENST00000551984.5

FGD4-215, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 5

Gene FGD4, Length 2,435 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-215ENST00000551984 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
FGD4-215ENST00000551984 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
FGD4-215ENST00000551984 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
FGD4-215ENST00000551984 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
FGD4-215ENST00000551984 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
FGD4-215ENST00000551984 FOXD1Q16676 465 aa14.91□□□□□ -0.02
FGD4-215ENST00000551984 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
FGD4-215ENST00000551984 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
FGD4-215ENST00000551984 MSH5O43196 834 aa14.11□□□□□ -0.15
FGD4-215ENST00000551984 ABCC9O60706 1549 aa14.05□□□□□ -0.16
FGD4-215ENST00000551984 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
FGD4-215ENST00000551984 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
FGD4-215ENST00000551984 ADRA2BP18089 450 aa13.79□□□□□ -0.2
FGD4-215ENST00000551984 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
FGD4-215ENST00000551984 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
FGD4-215ENST00000551984 NACADO15069 1562 aa13.41□□□□□ -0.26
FGD4-215ENST00000551984 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
FGD4-215ENST00000551984 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
FGD4-215ENST00000551984 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.3
FGD4-215ENST00000551984 ZCCHC6Q5VYS8 1495 aaKnown RBP13.18□□□□□ -0.3
FGD4-215ENST00000551984 DCAF1Q9Y4B6 1507 aa13.14□□□□□ -0.31
FGD4-215ENST00000551984 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
FGD4-215ENST00000551984 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
FGD4-215ENST00000551984 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
FGD4-215ENST00000551984 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
FGD4-215ENST00000551984 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
FGD4-215ENST00000551984 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
FGD4-215ENST00000551984 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
FGD4-215ENST00000551984 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
FGD4-215ENST00000551984 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
FGD4-215ENST00000551984 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
FGD4-215ENST00000551984 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
FGD4-215ENST00000551984 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
FGD4-215ENST00000551984 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
FGD4-215ENST00000551984 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
FGD4-215ENST00000551984 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.43
FGD4-215ENST00000551984 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
FGD4-215ENST00000551984 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
FGD4-215ENST00000551984 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
FGD4-215ENST00000551984 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
FGD4-215ENST00000551984 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
FGD4-215ENST00000551984 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.45
FGD4-215ENST00000551984 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.46
FGD4-215ENST00000551984 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
FGD4-215ENST00000551984 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
FGD4-215ENST00000551984 CUX2O14529 1486 aa12.12□□□□□ -0.47
FGD4-215ENST00000551984 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
FGD4-215ENST00000551984 NESP48681 1621 aa12.11□□□□□ -0.47
FGD4-215ENST00000551984 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
FGD4-215ENST00000551984 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
FGD4-215ENST00000551984 WIZO95785 1651 aa12.07□□□□□ -0.48
FGD4-215ENST00000551984 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
FGD4-215ENST00000551984 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.48
FGD4-215ENST00000551984 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
FGD4-215ENST00000551984 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
FGD4-215ENST00000551984 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
FGD4-215ENST00000551984 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
FGD4-215ENST00000551984 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
FGD4-215ENST00000551984 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
FGD4-215ENST00000551984 RNF39Q9H2S5 420 aa11.96□□□□□ -0.5
FGD4-215ENST00000551984 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
FGD4-215ENST00000551984 CFTRP13569 1480 aa11.88□□□□□ -0.51
FGD4-215ENST00000551984 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
FGD4-215ENST00000551984 WDR62O43379 1518 aa11.86□□□□□ -0.51
FGD4-215ENST00000551984 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
FGD4-215ENST00000551984 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
FGD4-215ENST00000551984 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.51
FGD4-215ENST00000551984 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
FGD4-215ENST00000551984 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
FGD4-215ENST00000551984 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
FGD4-215ENST00000551984 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
FGD4-215ENST00000551984 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
FGD4-215ENST00000551984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
FGD4-215ENST00000551984 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
FGD4-215ENST00000551984 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
FGD4-215ENST00000551984 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
FGD4-215ENST00000551984 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
FGD4-215ENST00000551984 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
FGD4-215ENST00000551984 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
FGD4-215ENST00000551984 OSCARQ8IYS5 282 aa11.52□□□□□ -0.56
FGD4-215ENST00000551984 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.57
FGD4-215ENST00000551984 CUX1P39880 1505 aa11.47□□□□□ -0.57
FGD4-215ENST00000551984 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.57
FGD4-215ENST00000551984 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
FGD4-215ENST00000551984 RAD54L2Q9Y4B4 1467 aa11.45□□□□□ -0.58
FGD4-215ENST00000551984 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
FGD4-215ENST00000551984 SOGA1O94964 1423 aa11.45□□□□□ -0.58
FGD4-215ENST00000551984 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
FGD4-215ENST00000551984 CHD1O14646 1710 aa11.44□□□□□ -0.58
FGD4-215ENST00000551984 KCNA4P22459 653 aa11.43□□□□□ -0.58
FGD4-215ENST00000551984 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
FGD4-215ENST00000551984 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
FGD4-215ENST00000551984 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
FGD4-215ENST00000551984 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
FGD4-215ENST00000551984 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
FGD4-215ENST00000551984 ARHGEF11O15085 1522 aa11.38□□□□□ -0.59
FGD4-215ENST00000551984 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
FGD4-215ENST00000551984 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
FGD4-215ENST00000551984 MAGI1Q96QZ7 1491 aaPredicted RBP11.36□□□□□ -0.59
FGD4-215ENST00000551984 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms