RNA–Protein interactions for RNA: ENST00000550977.2

CFAP54-203, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 5

Gene CFAP54, Length 2,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-203ENST00000550977 NISCHQ9Y2I1 1504 aa11.57□□□□□ -0.56
CFAP54-203ENST00000550977 AEBP2Q6ZN18 517 aaPredicted RBP10.35□□□□□ -0.75
CFAP54-203ENST00000550977 CHIC1Q5VXU3 224 aa10.29□□□□□ -0.76
CFAP54-203ENST00000550977 CCDC180Q9P1Z9 1646 aa10.03□□□□□ -0.8
CFAP54-203ENST00000550977 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.81
CFAP54-203ENST00000550977 ZCCHC6Q5VYS8 1495 aaKnown RBP9.92□□□□□ -0.82
CFAP54-203ENST00000550977 HRCP23327 699 aa9.92□□□□□ -0.82
CFAP54-203ENST00000550977 DCAF1Q9Y4B6 1507 aa9.89□□□□□ -0.83
CFAP54-203ENST00000550977 MYT1Q01538 1121 aa9.76□□□□□ -0.85
CFAP54-203ENST00000550977 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
CFAP54-203ENST00000550977 MYO15BQ96JP2 1530 aa9.57□□□□□ -0.88
CFAP54-203ENST00000550977 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.89
CFAP54-203ENST00000550977 ABCC9O60706 1549 aa9.45□□□□□ -0.9
CFAP54-203ENST00000550977 PHF23Q9BUL5 403 aaPredicted RBP9.42□□□□□ -0.9
CFAP54-203ENST00000550977 SUPT5HO00267 1087 aaKnown RBP9.35□□□□□ -0.91
CFAP54-203ENST00000550977 SHROOM4Q9ULL8 1493 aa9.34□□□□□ -0.91
CFAP54-203ENST00000550977 PCGF6Q9BYE7 350 aa9.34□□□□□ -0.91
CFAP54-203ENST00000550977 RB1CC1Q8TDY2 1594 aa9.3□□□□□ -0.92
CFAP54-203ENST00000550977 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
CFAP54-203ENST00000550977 CLSPNQ9HAW4 1339 aa9.19□□□□□ -0.94
CFAP54-203ENST00000550977 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
CFAP54-203ENST00000550977 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
CFAP54-203ENST00000550977 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
CFAP54-203ENST00000550977 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
CFAP54-203ENST00000550977 EIF4G1Q04637 1599 aaKnown RBP9.13□□□□□ -0.95
CFAP54-203ENST00000550977 ACIN1Q9UKV3 1341 aaKnown RBP9.13□□□□□ -0.95
CFAP54-203ENST00000550977 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
CFAP54-203ENST00000550977 EEA1Q15075 1411 aa9.08□□□□□ -0.96
CFAP54-203ENST00000550977 NACADO15069 1562 aa9.07□□□□□ -0.96
CFAP54-203ENST00000550977 BAZ1AQ9NRL2 1556 aaPredicted RBP9.06□□□□□ -0.96
CFAP54-203ENST00000550977 LOC105371045A0A1W2PR82 267 aa8.97□□□□□ -0.97
CFAP54-203ENST00000550977 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
CFAP54-203ENST00000550977 TNIKQ9UKE5 1360 aa8.93□□□□□ -0.98
CFAP54-203ENST00000550977 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
CFAP54-203ENST00000550977 KIF21BO75037 1637 aa8.89□□□□□ -0.99
CFAP54-203ENST00000550977 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
CFAP54-203ENST00000550977 NEUROD1Q13562 356 aa8.88□□□□□ -0.99
CFAP54-203ENST00000550977 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
CFAP54-203ENST00000550977 BAZ1BQ9UIG0 1483 aaKnown RBP8.86□□□□□ -0.99
CFAP54-203ENST00000550977 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
CFAP54-203ENST00000550977 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
CFAP54-203ENST00000550977 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -1
CFAP54-203ENST00000550977 MROH2BQ7Z745 1585 aa8.83□□□□□ -1
CFAP54-203ENST00000550977 GOLGA3Q08378 1498 aa8.81□□□□□ -1
CFAP54-203ENST00000550977 PEG3Q9GZU2 1588 aa8.81□□□□□ -1
CFAP54-203ENST00000550977 CEP162Q5TB80 1403 aa8.8□□□□□ -1
CFAP54-203ENST00000550977 WIZO95785 1651 aa8.79□□□□□ -1
CFAP54-203ENST00000550977 CCER1Q8TC90 406 aaPredicted RBP8.79□□□□□ -1
CFAP54-203ENST00000550977 SMARCA2P51531 1590 aa8.78□□□□□ -1
CFAP54-203ENST00000550977 CUX2O14529 1486 aa8.78□□□□□ -1
CFAP54-203ENST00000550977 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
CFAP54-203ENST00000550977 CEP164Q9UPV0 1460 aa8.76□□□□□ -1.01
CFAP54-203ENST00000550977 ERICH3Q5RHP9 1530 aa8.72□□□□□ -1.01
CFAP54-203ENST00000550977 POTEDQ86YR6 584 aa8.7□□□□□ -1.02
CFAP54-203ENST00000550977 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
CFAP54-203ENST00000550977 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
CFAP54-203ENST00000550977 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
CFAP54-203ENST00000550977 MYT1LQ9UL68 1186 aa8.67□□□□□ -1.02
CFAP54-203ENST00000550977 CCDC88BA6NC98 1476 aa8.66□□□□□ -1.02
CFAP54-203ENST00000550977 BIVM-ERCC5R4GMW8 1640 aa8.64□□□□□ -1.03
CFAP54-203ENST00000550977 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
CFAP54-203ENST00000550977 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
CFAP54-203ENST00000550977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.63□□□□□ -1.03
CFAP54-203ENST00000550977 RRBP1Q9P2E9 1410 aaKnown RBP8.62□□□□□ -1.03
CFAP54-203ENST00000550977 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
CFAP54-203ENST00000550977 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
CFAP54-203ENST00000550977 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
CFAP54-203ENST00000550977 ABCC8Q09428 1581 aa8.59□□□□□ -1.03
CFAP54-203ENST00000550977 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
CFAP54-203ENST00000550977 CLIP1P30622 1438 aa8.58□□□□□ -1.04
CFAP54-203ENST00000550977 ADRA2BP18089 450 aa8.56□□□□□ -1.04
CFAP54-203ENST00000550977 UNC13AQ9UPW8 1703 aa8.56□□□□□ -1.04
CFAP54-203ENST00000550977 ERICH6BQ5W0A0 696 aa8.56□□□□□ -1.04
CFAP54-203ENST00000550977 SENP3Q9H4L4 574 aaPredicted RBP8.55□□□□□ -1.04
CFAP54-203ENST00000550977 SUPT16HQ9Y5B9 1047 aaKnown RBP8.55□□□□□ -1.04
CFAP54-203ENST00000550977 DHX57Q6P158 1386 aaKnown RBP8.54□□□□□ -1.04
CFAP54-203ENST00000550977 SOGA1O94964 1423 aa8.54□□□□□ -1.04
CFAP54-203ENST00000550977 MIER1Q8N108 512 aa8.54□□□□□ -1.04
CFAP54-203ENST00000550977 PLPPR3Q6T4P5 718 aa8.53□□□□□ -1.04
CFAP54-203ENST00000550977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.05
CFAP54-203ENST00000550977 PRXQ9BXM0 1461 aa8.52□□□□□ -1.05
CFAP54-203ENST00000550977 TSHZ2Q9NRE2 1034 aa8.5□□□□□ -1.05
CFAP54-203ENST00000550977 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
CFAP54-203ENST00000550977 CCER2I3L3R5 266 aa8.5□□□□□ -1.05
CFAP54-203ENST00000550977 KCNA4P22459 653 aa8.5□□□□□ -1.05
CFAP54-203ENST00000550977 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
CFAP54-203ENST00000550977 FANCIQ9NVI1 1328 aa8.47□□□□□ -1.05
CFAP54-203ENST00000550977 CFAP43Q8NDM7 1665 aa8.47□□□□□ -1.05
CFAP54-203ENST00000550977 ARAP1Q96P48 1450 aa8.46□□□□□ -1.06
CFAP54-203ENST00000550977 BCL11AQ9H165 835 aa8.44□□□□□ -1.06
CFAP54-203ENST00000550977 HMGXB3Q12766 1538 aa8.43□□□□□ -1.06
CFAP54-203ENST00000550977 APLP2Q06481 763 aa8.43□□□□□ -1.06
CFAP54-203ENST00000550977 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
CFAP54-203ENST00000550977 MAPKBP1O60336 1514 aa8.41□□□□□ -1.06
CFAP54-203ENST00000550977 TIAM1Q13009 1591 aa8.41□□□□□ -1.06
CFAP54-203ENST00000550977 AQRO60306 1485 aaKnown RBP eCLIP8.4□□□□□ -1.06
CFAP54-203ENST00000550977 RAPGEF2Q9Y4G8 1499 aa8.4□□□□□ -1.06
CFAP54-203ENST00000550977 BICRAQ9NZM4 1560 aa8.4□□□□□ -1.06
CFAP54-203ENST00000550977 CCNB3Q8WWL7 1395 aa8.39□□□□□ -1.07
CFAP54-203ENST00000550977 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms