RNA–Protein interactions for RNA: ENST00000550782.5

SLC11A2-223, Transcript of solute carrier family 11 member 2, human

TSL 2

Gene SLC11A2, Length 3,490 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC11A2-223	ENST00000550782	NISCH	Q9Y2I1	1504 aa		13.83	□□□□□ -0.2
SLC11A2-223	ENST00000550782	DCAF8L2	P0C7V8	631 aa		12.42	□□□□□ -0.42
SLC11A2-223	ENST00000550782	SHROOM4	Q9ULL8	1493 aa		12.17	□□□□□ -0.46
SLC11A2-223	ENST00000550782	ABCC9	O60706	1549 aa		11.84	□□□□□ -0.51
SLC11A2-223	ENST00000550782	SUPT5H	O00267	1087 aa	Known RBP	11.73	□□□□□ -0.53
SLC11A2-223	ENST00000550782	CCDC180	Q9P1Z9	1646 aa		11.67	□□□□□ -0.54
SLC11A2-223	ENST00000550782	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.54	□□□□□ -0.56
SLC11A2-223	ENST00000550782	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SLC11A2-223	ENST00000550782	SCRIB	Q14160	1630 aa		11.37	□□□□□ -0.59
SLC11A2-223	ENST00000550782	EHMT2	Q96KQ7	1210 aa		11.17	□□□□□ -0.62
SLC11A2-223	ENST00000550782	PELP1	Q8IZL8	1130 aa	Known RBP	11.1	□□□□□ -0.63
SLC11A2-223	ENST00000550782	CECR2	Q9BXF3	1484 aa		11.06	□□□□□ -0.64
SLC11A2-223	ENST00000550782	RB1CC1	Q8TDY2	1594 aa		11.03	□□□□□ -0.64
SLC11A2-223	ENST00000550782	DCAF1	Q9Y4B6	1507 aa		11.02	□□□□□ -0.64
SLC11A2-223	ENST00000550782	NACAD	O15069	1562 aa		11.02	□□□□□ -0.65
SLC11A2-223	ENST00000550782	MYT1	Q01538	1121 aa		10.99	□□□□□ -0.65
SLC11A2-223	ENST00000550782	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.98	□□□□□ -0.65
SLC11A2-223	ENST00000550782	RSF1	Q96T23	1441 aa	Predicted RBP	10.9	□□□□□ -0.67
SLC11A2-223	ENST00000550782	MROH2B	Q7Z745	1585 aa		10.87	□□□□□ -0.67
SLC11A2-223	ENST00000550782	CHIC1	Q5VXU3	224 aa		10.87	□□□□□ -0.67
SLC11A2-223	ENST00000550782	UNC13A	Q9UPW8	1703 aa		10.83	□□□□□ -0.68
SLC11A2-223	ENST00000550782	LOC105371045	A0A1W2PR82	267 aa		10.81	□□□□□ -0.68
SLC11A2-223	ENST00000550782	WIZ	O95785	1651 aa		10.8	□□□□□ -0.68
SLC11A2-223	ENST00000550782	MYO15B	Q96JP2	1530 aa		10.79	□□□□□ -0.68
SLC11A2-223	ENST00000550782	BICRA	Q9NZM4	1560 aa		10.76	□□□□□ -0.69
SLC11A2-223	ENST00000550782	TRIM41	Q8WV44	630 aa		10.75	□□□□□ -0.69
SLC11A2-223	ENST00000550782	DNAJC5B	Q9UF47	199 aa		10.72	□□□□□ -0.69
SLC11A2-223	ENST00000550782	HRC	P23327	699 aa		10.71	□□□□□ -0.69
SLC11A2-223	ENST00000550782	RANGAP1	P46060	587 aa	Predicted RBP	10.68	□□□□□ -0.7
SLC11A2-223	ENST00000550782	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.63	□□□□□ -0.71
SLC11A2-223	ENST00000550782	SLC24A1	O60721	1099 aa		10.62	□□□□□ -0.71
SLC11A2-223	ENST00000550782	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.62	□□□□□ -0.71
SLC11A2-223	ENST00000550782	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.61	□□□□□ -0.71
SLC11A2-223	ENST00000550782	PRKCSH	P14314	528 aa	Predicted RBP	10.6	□□□□□ -0.71
SLC11A2-223	ENST00000550782	SMARCA4	P51532	1647 aa		10.6	□□□□□ -0.71
SLC11A2-223	ENST00000550782	PCGF6	Q9BYE7	350 aa		10.57	□□□□□ -0.72
SLC11A2-223	ENST00000550782	CCDC88B	A6NC98	1476 aa		10.56	□□□□□ -0.72
SLC11A2-223	ENST00000550782	ABCC8	Q09428	1581 aa		10.54	□□□□□ -0.72
SLC11A2-223	ENST00000550782	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.53	□□□□□ -0.72
SLC11A2-223	ENST00000550782	ATAD2B	Q9ULI0	1458 aa		10.52	□□□□□ -0.73
SLC11A2-223	ENST00000550782	EIF4G1	Q04637	1599 aa	Known RBP	10.5	□□□□□ -0.73
SLC11A2-223	ENST00000550782	TOP2A	P11388	1531 aa	Known RBP	10.43	□□□□□ -0.74
SLC11A2-223	ENST00000550782	SMARCA2	P51531	1590 aa		10.43	□□□□□ -0.74
SLC11A2-223	ENST00000550782	UBTF	P17480	764 aa	Known RBP	10.41	□□□□□ -0.74
SLC11A2-223	ENST00000550782	CC2D2A	Q9P2K1	1620 aa		10.4	□□□□□ -0.74
SLC11A2-223	ENST00000550782	NES	P48681	1621 aa		10.37	□□□□□ -0.75
SLC11A2-223	ENST00000550782	RUSC2	Q8N2Y8	1516 aa		10.37	□□□□□ -0.75
SLC11A2-223	ENST00000550782	SOGA1	O94964	1423 aa		10.36	□□□□□ -0.75
SLC11A2-223	ENST00000550782	ERICH6	Q7L0X2	663 aa		10.35	□□□□□ -0.75
SLC11A2-223	ENST00000550782	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.29	□□□□□ -0.76
SLC11A2-223	ENST00000550782	NCAPD3	P42695	1498 aa		10.27	□□□□□ -0.76
SLC11A2-223	ENST00000550782	CSRNP3	Q8WYN3	585 aa		10.24	□□□□□ -0.77
SLC11A2-223	ENST00000550782	APLP2	Q06481	763 aa		10.24	□□□□□ -0.77
SLC11A2-223	ENST00000550782	P3H3	Q8IVL6	736 aa		10.24	□□□□□ -0.77
SLC11A2-223	ENST00000550782	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.24	□□□□□ -0.77
SLC11A2-223	ENST00000550782	SYNJ1	O43426	1573 aa		10.21	□□□□□ -0.78
SLC11A2-223	ENST00000550782	CADPS	Q9ULU8	1353 aa		10.2	□□□□□ -0.78
SLC11A2-223	ENST00000550782	PEG3	Q9GZU2	1588 aa		10.19	□□□□□ -0.78
SLC11A2-223	ENST00000550782	ARID3C	A6NKF2	412 aa		10.18	□□□□□ -0.78
SLC11A2-223	ENST00000550782	FBLN2	P98095	1184 aa		10.17	□□□□□ -0.78
SLC11A2-223	ENST00000550782	SCAF1	Q9H7N4	1312 aa	Known RBP	10.17	□□□□□ -0.78
SLC11A2-223	ENST00000550782	TRIM26	Q12899	539 aa	Predicted RBP	10.16	□□□□□ -0.78
SLC11A2-223	ENST00000550782	BCL11A	Q9H165	835 aa		10.15	□□□□□ -0.78
SLC11A2-223	ENST00000550782	TDRD9	Q8NDG6	1382 aa	Known RBP	10.14	□□□□□ -0.79
SLC11A2-223	ENST00000550782	RAD54L2	Q9Y4B4	1467 aa		10.14	□□□□□ -0.79
SLC11A2-223	ENST00000550782	HMGXB3	Q12766	1538 aa		10.14	□□□□□ -0.79
SLC11A2-223	ENST00000550782	FANCD2	Q9BXW9	1451 aa		10.13	□□□□□ -0.79
SLC11A2-223	ENST00000550782	CFTR	P13569	1480 aa		10.11	□□□□□ -0.79
SLC11A2-223	ENST00000550782	CUX1	P39880	1505 aa		10.11	□□□□□ -0.79
SLC11A2-223	ENST00000550782	CUX2	O14529	1486 aa		10.1	□□□□□ -0.79
SLC11A2-223	ENST00000550782	ERCC6	Q03468	1493 aa		10.07	□□□□□ -0.8
SLC11A2-223	ENST00000550782	RAPGEF2	Q9Y4G8	1499 aa		10.07	□□□□□ -0.8
SLC11A2-223	ENST00000550782	FGD5	Q6ZNL6	1462 aa		10.06	□□□□□ -0.8
SLC11A2-223	ENST00000550782	ITGAE	P38570	1179 aa		10.05	□□□□□ -0.8
SLC11A2-223	ENST00000550782	ZEB1	P37275	1124 aa	Predicted RBP	10.04	□□□□□ -0.8
SLC11A2-223	ENST00000550782	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.04	□□□□□ -0.8
SLC11A2-223	ENST00000550782	CEP162	Q5TB80	1403 aa		10.03	□□□□□ -0.8
SLC11A2-223	ENST00000550782	CEP164	Q9UPV0	1460 aa		10.02	□□□□□ -0.81
SLC11A2-223	ENST00000550782	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.01	□□□□□ -0.81
SLC11A2-223	ENST00000550782	AQR	O60306	1485 aa	Known RBP eCLIP	10	□□□□□ -0.81	5e-6	■■□□□ 12.2
SLC11A2-223	ENST00000550782	DAXX	Q9UER7	740 aa	Predicted RBP	9.99	□□□□□ -0.81
SLC11A2-223	ENST00000550782	URB2	Q14146	1524 aa	Known RBP	9.98	□□□□□ -0.81
SLC11A2-223	ENST00000550782	PDS5B	Q9NTI5	1447 aa		9.98	□□□□□ -0.81
SLC11A2-223	ENST00000550782	KIF27	Q86VH2	1401 aa		9.98	□□□□□ -0.81
SLC11A2-223	ENST00000550782	TOPBP1	Q92547	1522 aa		9.97	□□□□□ -0.81
SLC11A2-223	ENST00000550782	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.97	□□□□□ -0.81
SLC11A2-223	ENST00000550782	POLA1	P09884	1462 aa	Predicted RBP	9.97	□□□□□ -0.81
SLC11A2-223	ENST00000550782	TOP2B	Q02880	1626 aa		9.96	□□□□□ -0.81
SLC11A2-223	ENST00000550782	KIF21A	Q7Z4S6	1674 aa		9.96	□□□□□ -0.82
SLC11A2-223	ENST00000550782	GOLGA3	Q08378	1498 aa		9.95	□□□□□ -0.82
SLC11A2-223	ENST00000550782	CLIP1	P30622	1438 aa		9.95	□□□□□ -0.82
SLC11A2-223	ENST00000550782	IGF1R	P08069	1367 aa		9.94	□□□□□ -0.82
SLC11A2-223	ENST00000550782	CARMIL1	Q5VZK9	1371 aa		9.94	□□□□□ -0.82
SLC11A2-223	ENST00000550782	ZNF608	Q9ULD9	1512 aa	Predicted RBP	9.93	□□□□□ -0.82
SLC11A2-223	ENST00000550782	NEUROD1	Q13562	356 aa		9.91	□□□□□ -0.82
SLC11A2-223	ENST00000550782	KANK4	Q5T7N3	995 aa	Predicted RBP	9.91	□□□□□ -0.82
SLC11A2-223	ENST00000550782	TNIK	Q9UKE5	1360 aa		9.9	□□□□□ -0.82
SLC11A2-223	ENST00000550782	ACIN1	Q9UKV3	1341 aa	Known RBP	9.9	□□□□□ -0.82
SLC11A2-223	ENST00000550782	CHMP7	Q8WUX9	453 aa	Predicted RBP	9.9	□□□□□ -0.83
SLC11A2-223	ENST00000550782	LAMC3	Q9Y6N6	1575 aa		9.86	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms