RNA–Protein interactions for RNA: ENST00000550672.5

SLC8B1-211, Transcript of solute carrier family 8 member B1, humanhuman

TSL 1 (best)

Gene SLC8B1, Length 2,925 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-211ENST00000550672 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
SLC8B1-211ENST00000550672 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
SLC8B1-211ENST00000550672 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
SLC8B1-211ENST00000550672 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
SLC8B1-211ENST00000550672 DCAF8L2P0C7V8 631 aa22.53■■□□□ 1.2
SLC8B1-211ENST00000550672 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
SLC8B1-211ENST00000550672 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.12
SLC8B1-211ENST00000550672 HRCP23327 699 aa21.98■■□□□ 1.11
SLC8B1-211ENST00000550672 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
SLC8B1-211ENST00000550672 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
SLC8B1-211ENST00000550672 ABCC9O60706 1549 aa21.74■■□□□ 1.07
SLC8B1-211ENST00000550672 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
SLC8B1-211ENST00000550672 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.03
SLC8B1-211ENST00000550672 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
SLC8B1-211ENST00000550672 NACADO15069 1562 aa21.38■■□□□ 1.01
SLC8B1-211ENST00000550672 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
SLC8B1-211ENST00000550672 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
SLC8B1-211ENST00000550672 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
SLC8B1-211ENST00000550672 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
SLC8B1-211ENST00000550672 LOC105371045A0A1W2PR82 267 aa21.02■□□□□ 0.96
SLC8B1-211ENST00000550672 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
SLC8B1-211ENST00000550672 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
SLC8B1-211ENST00000550672 MYT1Q01538 1121 aa20.9■□□□□ 0.94
SLC8B1-211ENST00000550672 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
SLC8B1-211ENST00000550672 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.92
SLC8B1-211ENST00000550672 WIZO95785 1651 aa20.79■□□□□ 0.92
SLC8B1-211ENST00000550672 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
SLC8B1-211ENST00000550672 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
SLC8B1-211ENST00000550672 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
SLC8B1-211ENST00000550672 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.89
SLC8B1-211ENST00000550672 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
SLC8B1-211ENST00000550672 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
SLC8B1-211ENST00000550672 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
SLC8B1-211ENST00000550672 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
SLC8B1-211ENST00000550672 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
SLC8B1-211ENST00000550672 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
SLC8B1-211ENST00000550672 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
SLC8B1-211ENST00000550672 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.84
SLC8B1-211ENST00000550672 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
SLC8B1-211ENST00000550672 GTF3C3Q9Y5Q9 886 aa20.28■□□□□ 0.84
SLC8B1-211ENST00000550672 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
SLC8B1-211ENST00000550672 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
SLC8B1-211ENST00000550672 PEG3Q9GZU2 1588 aa20.16■□□□□ 0.82
SLC8B1-211ENST00000550672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
SLC8B1-211ENST00000550672 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
SLC8B1-211ENST00000550672 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.8
SLC8B1-211ENST00000550672 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
SLC8B1-211ENST00000550672 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
SLC8B1-211ENST00000550672 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
SLC8B1-211ENST00000550672 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
SLC8B1-211ENST00000550672 SOGA1O94964 1423 aa19.94■□□□□ 0.78
SLC8B1-211ENST00000550672 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
SLC8B1-211ENST00000550672 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
SLC8B1-211ENST00000550672 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
SLC8B1-211ENST00000550672 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
SLC8B1-211ENST00000550672 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
SLC8B1-211ENST00000550672 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
SLC8B1-211ENST00000550672 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
SLC8B1-211ENST00000550672 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
SLC8B1-211ENST00000550672 EEA1Q15075 1411 aa19.68■□□□□ 0.74
SLC8B1-211ENST00000550672 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
SLC8B1-211ENST00000550672 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
SLC8B1-211ENST00000550672 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
SLC8B1-211ENST00000550672 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
SLC8B1-211ENST00000550672 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
SLC8B1-211ENST00000550672 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
SLC8B1-211ENST00000550672 MIER1Q8N108 512 aa19.55■□□□□ 0.72
SLC8B1-211ENST00000550672 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
SLC8B1-211ENST00000550672 CFTRP13569 1480 aa19.54■□□□□ 0.72
SLC8B1-211ENST00000550672 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
SLC8B1-211ENST00000550672 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
SLC8B1-211ENST00000550672 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
SLC8B1-211ENST00000550672 CUX1P39880 1505 aa19.49■□□□□ 0.71
SLC8B1-211ENST00000550672 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
SLC8B1-211ENST00000550672 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
SLC8B1-211ENST00000550672 KIF21BO75037 1637 aa19.44■□□□□ 0.7
SLC8B1-211ENST00000550672 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
SLC8B1-211ENST00000550672 CLIP1P30622 1438 aa19.34■□□□□ 0.69
SLC8B1-211ENST00000550672 PRDM2Q13029 1718 aa19.33■□□□□ 0.69
SLC8B1-211ENST00000550672 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
SLC8B1-211ENST00000550672 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
SLC8B1-211ENST00000550672 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
SLC8B1-211ENST00000550672 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
SLC8B1-211ENST00000550672 NESP48681 1621 aa19.26■□□□□ 0.67
SLC8B1-211ENST00000550672 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
SLC8B1-211ENST00000550672 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
SLC8B1-211ENST00000550672 CUX2O14529 1486 aa19.21■□□□□ 0.67
SLC8B1-211ENST00000550672 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.66
SLC8B1-211ENST00000550672 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
SLC8B1-211ENST00000550672 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
SLC8B1-211ENST00000550672 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
SLC8B1-211ENST00000550672 IGF1RP08069 1367 aa19.14■□□□□ 0.65
SLC8B1-211ENST00000550672 APLP2Q06481 763 aa19.13■□□□□ 0.65
SLC8B1-211ENST00000550672 TSHZ2Q9NRE2 1034 aa19.13■□□□□ 0.65
SLC8B1-211ENST00000550672 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
SLC8B1-211ENST00000550672 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
SLC8B1-211ENST00000550672 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
SLC8B1-211ENST00000550672 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
SLC8B1-211ENST00000550672 CARMIL1Q5VZK9 1371 aa19.05■□□□□ 0.64
SLC8B1-211ENST00000550672 BCANQ96GW7 911 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms