RNA–Protein interactions for RNA: ENST00000548481.1

CNTN1-206, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-206ENST00000548481 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
CNTN1-206ENST00000548481 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
CNTN1-206ENST00000548481 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
CNTN1-206ENST00000548481 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
CNTN1-206ENST00000548481 FOXD1Q16676 465 aa18.48■□□□□ 0.55
CNTN1-206ENST00000548481 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
CNTN1-206ENST00000548481 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
CNTN1-206ENST00000548481 MSH5O43196 834 aa17.28■□□□□ 0.36
CNTN1-206ENST00000548481 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
CNTN1-206ENST00000548481 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
CNTN1-206ENST00000548481 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
CNTN1-206ENST00000548481 ADRA2BP18089 450 aa16.99■□□□□ 0.31
CNTN1-206ENST00000548481 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
CNTN1-206ENST00000548481 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
CNTN1-206ENST00000548481 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
CNTN1-206ENST00000548481 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
CNTN1-206ENST00000548481 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
CNTN1-206ENST00000548481 ABCC9O60706 1549 aa15.01□□□□□ -0.01
CNTN1-206ENST00000548481 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
CNTN1-206ENST00000548481 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
CNTN1-206ENST00000548481 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
CNTN1-206ENST00000548481 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
CNTN1-206ENST00000548481 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
CNTN1-206ENST00000548481 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
CNTN1-206ENST00000548481 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
CNTN1-206ENST00000548481 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
CNTN1-206ENST00000548481 NACADO15069 1562 aa14.63□□□□□ -0.07
CNTN1-206ENST00000548481 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
CNTN1-206ENST00000548481 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
CNTN1-206ENST00000548481 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
CNTN1-206ENST00000548481 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
CNTN1-206ENST00000548481 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
CNTN1-206ENST00000548481 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
CNTN1-206ENST00000548481 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
CNTN1-206ENST00000548481 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
CNTN1-206ENST00000548481 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
CNTN1-206ENST00000548481 SHROOM4Q9ULL8 1493 aa14.17□□□□□ -0.14
CNTN1-206ENST00000548481 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
CNTN1-206ENST00000548481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
CNTN1-206ENST00000548481 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
CNTN1-206ENST00000548481 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
CNTN1-206ENST00000548481 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
CNTN1-206ENST00000548481 KCNA4P22459 653 aa13.78□□□□□ -0.2
CNTN1-206ENST00000548481 DSG3P32926 999 aa13.78□□□□□ -0.2
CNTN1-206ENST00000548481 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
CNTN1-206ENST00000548481 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
CNTN1-206ENST00000548481 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
CNTN1-206ENST00000548481 BAZ1AQ9NRL2 1556 aaPredicted RBP13.73□□□□□ -0.21
CNTN1-206ENST00000548481 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
CNTN1-206ENST00000548481 CAPN15O75808 1086 aa13.66□□□□□ -0.22
CNTN1-206ENST00000548481 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
CNTN1-206ENST00000548481 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
CNTN1-206ENST00000548481 WIZO95785 1651 aa13.62□□□□□ -0.23
CNTN1-206ENST00000548481 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
CNTN1-206ENST00000548481 SMARCA2P51531 1590 aa13.55□□□□□ -0.24
CNTN1-206ENST00000548481 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
CNTN1-206ENST00000548481 POTEHQ6S545 545 aa13.54□□□□□ -0.24
CNTN1-206ENST00000548481 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
CNTN1-206ENST00000548481 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
CNTN1-206ENST00000548481 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CNTN1-206ENST00000548481 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
CNTN1-206ENST00000548481 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
CNTN1-206ENST00000548481 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
CNTN1-206ENST00000548481 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
CNTN1-206ENST00000548481 ABCB7O75027 752 aa13.36□□□□□ -0.27
CNTN1-206ENST00000548481 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
CNTN1-206ENST00000548481 APLP2Q06481 763 aa13.31□□□□□ -0.28
CNTN1-206ENST00000548481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
CNTN1-206ENST00000548481 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
CNTN1-206ENST00000548481 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
CNTN1-206ENST00000548481 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
CNTN1-206ENST00000548481 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
CNTN1-206ENST00000548481 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
CNTN1-206ENST00000548481 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
CNTN1-206ENST00000548481 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
CNTN1-206ENST00000548481 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.32
CNTN1-206ENST00000548481 NESP48681 1621 aa13.07□□□□□ -0.32
CNTN1-206ENST00000548481 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
CNTN1-206ENST00000548481 CFTRP13569 1480 aa13.04□□□□□ -0.32
CNTN1-206ENST00000548481 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
CNTN1-206ENST00000548481 POLA2Q14181 598 aa13.02□□□□□ -0.33
CNTN1-206ENST00000548481 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
CNTN1-206ENST00000548481 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
CNTN1-206ENST00000548481 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
CNTN1-206ENST00000548481 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
CNTN1-206ENST00000548481 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
CNTN1-206ENST00000548481 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
CNTN1-206ENST00000548481 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
CNTN1-206ENST00000548481 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
CNTN1-206ENST00000548481 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
CNTN1-206ENST00000548481 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
CNTN1-206ENST00000548481 DNMBPQ6XZF7 1577 aa12.84□□□□□ -0.35
CNTN1-206ENST00000548481 MRC2Q9UBG0 1479 aa12.84□□□□□ -0.35
CNTN1-206ENST00000548481 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
CNTN1-206ENST00000548481 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
CNTN1-206ENST00000548481 WDR62O43379 1518 aa12.8□□□□□ -0.36
CNTN1-206ENST00000548481 CUX1P39880 1505 aa12.8□□□□□ -0.36
CNTN1-206ENST00000548481 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
CNTN1-206ENST00000548481 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
CNTN1-206ENST00000548481 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms