RNA–Protein interactions for RNA: ENST00000548158.1

RACGAP1-210, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 596 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-210ENST00000548158 AEBP2Q6ZN18 517 aaPredicted RBP12.78□□□□□ -0.36
RACGAP1-210ENST00000548158 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
RACGAP1-210ENST00000548158 NISCHQ9Y2I1 1504 aa11.77□□□□□ -0.52
RACGAP1-210ENST00000548158 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
RACGAP1-210ENST00000548158 PHF23Q9BUL5 403 aaPredicted RBP10.84□□□□□ -0.67
RACGAP1-210ENST00000548158 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
RACGAP1-210ENST00000548158 FOXD1Q16676 465 aa10.37□□□□□ -0.75
RACGAP1-210ENST00000548158 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
RACGAP1-210ENST00000548158 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
RACGAP1-210ENST00000548158 MSH5O43196 834 aa10.07□□□□□ -0.8
RACGAP1-210ENST00000548158 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
RACGAP1-210ENST00000548158 MYO15BQ96JP2 1530 aa9.9□□□□□ -0.82
RACGAP1-210ENST00000548158 ZCCHC6Q5VYS8 1495 aaKnown RBP9.89□□□□□ -0.83
RACGAP1-210ENST00000548158 NACADO15069 1562 aa9.72□□□□□ -0.85
RACGAP1-210ENST00000548158 ABCC9O60706 1549 aa9.66□□□□□ -0.86
RACGAP1-210ENST00000548158 RB1CC1Q8TDY2 1594 aa9.61□□□□□ -0.87
RACGAP1-210ENST00000548158 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
RACGAP1-210ENST00000548158 PIAS4Q8N2W9 510 aaPredicted RBP9.59□□□□□ -0.87
RACGAP1-210ENST00000548158 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
RACGAP1-210ENST00000548158 SHROOM4Q9ULL8 1493 aa9.47□□□□□ -0.89
RACGAP1-210ENST00000548158 SCRIBQ14160 1630 aa9.28□□□□□ -0.92
RACGAP1-210ENST00000548158 AMER1Q5JTC6 1135 aaPredicted RBP9.25□□□□□ -0.93
RACGAP1-210ENST00000548158 RTN4Q9NQC3 1192 aaKnown RBP9.23□□□□□ -0.93
RACGAP1-210ENST00000548158 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
RACGAP1-210ENST00000548158 PPP6R1Q9UPN7 881 aa9.21□□□□□ -0.94
RACGAP1-210ENST00000548158 PLPPR3Q6T4P5 718 aa9.2□□□□□ -0.94
RACGAP1-210ENST00000548158 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
RACGAP1-210ENST00000548158 ADRA2BP18089 450 aa9.18□□□□□ -0.94
RACGAP1-210ENST00000548158 BAZ1AQ9NRL2 1556 aaPredicted RBP9.16□□□□□ -0.94
RACGAP1-210ENST00000548158 BICRAQ9NZM4 1560 aa9.14□□□□□ -0.95
RACGAP1-210ENST00000548158 RSF1Q96T23 1441 aaPredicted RBP9.07□□□□□ -0.96
RACGAP1-210ENST00000548158 UNC13AQ9UPW8 1703 aa9.07□□□□□ -0.96
RACGAP1-210ENST00000548158 PABPN1Q86U42 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
RACGAP1-210ENST00000548158 CSRNP3Q8WYN3 585 aa9.04□□□□□ -0.96
RACGAP1-210ENST00000548158 PEG3Q9GZU2 1588 aa9.03□□□□□ -0.96
RACGAP1-210ENST00000548158 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
RACGAP1-210ENST00000548158 SMARCA4P51532 1647 aa9.01□□□□□ -0.97
RACGAP1-210ENST00000548158 CACNB1Q02641 598 aaPredicted RBP9□□□□□ -0.97
RACGAP1-210ENST00000548158 KCNA4P22459 653 aa8.99□□□□□ -0.97
RACGAP1-210ENST00000548158 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
RACGAP1-210ENST00000548158 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
RACGAP1-210ENST00000548158 SUPT5HO00267 1087 aaKnown RBP8.97□□□□□ -0.97
RACGAP1-210ENST00000548158 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
RACGAP1-210ENST00000548158 EIF4G1Q04637 1599 aaKnown RBP8.95□□□□□ -0.98
RACGAP1-210ENST00000548158 ATAD2BQ9ULI0 1458 aa8.94□□□□□ -0.98
RACGAP1-210ENST00000548158 HMGXB3Q12766 1538 aa8.94□□□□□ -0.98
RACGAP1-210ENST00000548158 TOP2AP11388 1531 aaKnown RBP8.93□□□□□ -0.98
RACGAP1-210ENST00000548158 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
RACGAP1-210ENST00000548158 ARXQ96QS3 562 aa8.83□□□□□ -1
RACGAP1-210ENST00000548158 WIZO95785 1651 aa8.81□□□□□ -1
RACGAP1-210ENST00000548158 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1.01
RACGAP1-210ENST00000548158 CCDC88BA6NC98 1476 aa8.76□□□□□ -1.01
RACGAP1-210ENST00000548158 TTBK1Q5TCY1 1321 aaPredicted RBP8.72□□□□□ -1.01
RACGAP1-210ENST00000548158 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.02
RACGAP1-210ENST00000548158 CFTRP13569 1480 aa8.7□□□□□ -1.02
RACGAP1-210ENST00000548158 DMRT2Q9Y5R5 561 aa8.7□□□□□ -1.02
RACGAP1-210ENST00000548158 PRKCSHP14314 528 aaPredicted RBP8.69□□□□□ -1.02
RACGAP1-210ENST00000548158 SLC4A1APQ9BWU0 796 aaKnown RBP8.68□□□□□ -1.02
RACGAP1-210ENST00000548158 PDS5BQ9NTI5 1447 aa8.65□□□□□ -1.02
RACGAP1-210ENST00000548158 ABCC8Q09428 1581 aa8.65□□□□□ -1.03
RACGAP1-210ENST00000548158 LAMC3Q9Y6N6 1575 aa8.65□□□□□ -1.03
RACGAP1-210ENST00000548158 EEA1Q15075 1411 aa8.62□□□□□ -1.03
RACGAP1-210ENST00000548158 PELP1Q8IZL8 1130 aaKnown RBP8.6□□□□□ -1.03
RACGAP1-210ENST00000548158 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
RACGAP1-210ENST00000548158 BCANQ96GW7 911 aa8.6□□□□□ -1.03
RACGAP1-210ENST00000548158 TAOK2Q9UL54 1235 aa8.6□□□□□ -1.03
RACGAP1-210ENST00000548158 WRNQ14191 1432 aaPredicted RBP eCLIP8.59□□□□□ -1.03
RACGAP1-210ENST00000548158 MYT1Q01538 1121 aa8.56□□□□□ -1.04
RACGAP1-210ENST00000548158 APLP2Q06481 763 aa8.56□□□□□ -1.04
RACGAP1-210ENST00000548158 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
RACGAP1-210ENST00000548158 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
RACGAP1-210ENST00000548158 MAPK8IP2Q13387 824 aaPredicted RBP8.54□□□□□ -1.04
RACGAP1-210ENST00000548158 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
RACGAP1-210ENST00000548158 HOMEZQ8IX15 550 aa8.52□□□□□ -1.05
RACGAP1-210ENST00000548158 PRDM2Q13029 1718 aa8.51□□□□□ -1.05
RACGAP1-210ENST00000548158 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
RACGAP1-210ENST00000548158 TOP2BQ02880 1626 aa8.5□□□□□ -1.05
RACGAP1-210ENST00000548158 SCAF1Q9H7N4 1312 aaKnown RBP8.5□□□□□ -1.05
RACGAP1-210ENST00000548158 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
RACGAP1-210ENST00000548158 DNAJC5BQ9UF47 199 aa8.48□□□□□ -1.05
RACGAP1-210ENST00000548158 DNMBPQ6XZF7 1577 aa8.47□□□□□ -1.05
RACGAP1-210ENST00000548158 RNF39Q9H2S5 420 aa8.46□□□□□ -1.06
RACGAP1-210ENST00000548158 BIVM-ERCC5R4GMW8 1640 aa8.46□□□□□ -1.06
RACGAP1-210ENST00000548158 KIF27Q86VH2 1401 aa8.46□□□□□ -1.06
RACGAP1-210ENST00000548158 MRC2Q9UBG0 1479 aa8.45□□□□□ -1.06
RACGAP1-210ENST00000548158 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
RACGAP1-210ENST00000548158 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
RACGAP1-210ENST00000548158 PLCB2Q00722 1185 aa8.44□□□□□ -1.06
RACGAP1-210ENST00000548158 ERCC6Q03468 1493 aa8.43□□□□□ -1.06
RACGAP1-210ENST00000548158 TOPBP1Q92547 1522 aa8.42□□□□□ -1.06
RACGAP1-210ENST00000548158 CUX1P39880 1505 aa8.4□□□□□ -1.06
RACGAP1-210ENST00000548158 ABCA10Q8WWZ4 1543 aa8.4□□□□□ -1.06
RACGAP1-210ENST00000548158 DCAF8L1A6NGE4 600 aa8.4□□□□□ -1.06
RACGAP1-210ENST00000548158 TPRNQ4KMQ1 711 aa8.4□□□□□ -1.06
RACGAP1-210ENST00000548158 WDR62O43379 1518 aa8.39□□□□□ -1.07
RACGAP1-210ENST00000548158 IFT140Q96RY7 1462 aa8.39□□□□□ -1.07
RACGAP1-210ENST00000548158 POTEHQ6S545 545 aa8.39□□□□□ -1.07
RACGAP1-210ENST00000548158 NESP48681 1621 aa8.39□□□□□ -1.07
RACGAP1-210ENST00000548158 SYNJ1O43426 1573 aa8.39□□□□□ -1.07
RACGAP1-210ENST00000548158 SOGA1O94964 1423 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms