RNA–Protein interactions for RNA: ENST00000547804.1

LINC00941-201, long intergenic non-protein coding RNA 941, humanhuman

TSL 1 (best) BASIC

Gene LINC00941, Length 1,645 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00941-201ENST00000547804 AEBP2Q6ZN18 517 aaPredicted RBP29.96■■■□□ 2.39
LINC00941-201ENST00000547804 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
LINC00941-201ENST00000547804 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
LINC00941-201ENST00000547804 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
LINC00941-201ENST00000547804 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
LINC00941-201ENST00000547804 FOXD1Q16676 465 aa23.73■■□□□ 1.39
LINC00941-201ENST00000547804 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
LINC00941-201ENST00000547804 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
LINC00941-201ENST00000547804 ADRA2BP18089 450 aa22.29■■□□□ 1.16
LINC00941-201ENST00000547804 PIAS4Q8N2W9 510 aaPredicted RBP22.18■■□□□ 1.14
LINC00941-201ENST00000547804 MSH5O43196 834 aa22.02■■□□□ 1.11
LINC00941-201ENST00000547804 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
LINC00941-201ENST00000547804 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
LINC00941-201ENST00000547804 ABCC9O60706 1549 aa20.93■□□□□ 0.94
LINC00941-201ENST00000547804 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
LINC00941-201ENST00000547804 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
LINC00941-201ENST00000547804 NACADO15069 1562 aa20.23■□□□□ 0.83
LINC00941-201ENST00000547804 DCAF8L2P0C7V8 631 aa20.21■□□□□ 0.83
LINC00941-201ENST00000547804 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
LINC00941-201ENST00000547804 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
LINC00941-201ENST00000547804 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
LINC00941-201ENST00000547804 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
LINC00941-201ENST00000547804 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
LINC00941-201ENST00000547804 PPP4R3CPQ6ZMV5 832 aa20.02■□□□□ 0.79
LINC00941-201ENST00000547804 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
LINC00941-201ENST00000547804 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
LINC00941-201ENST00000547804 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
LINC00941-201ENST00000547804 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
LINC00941-201ENST00000547804 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
LINC00941-201ENST00000547804 HOXD11P31277 338 aaPredicted RBP19.46■□□□□ 0.71
LINC00941-201ENST00000547804 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
LINC00941-201ENST00000547804 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
LINC00941-201ENST00000547804 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
LINC00941-201ENST00000547804 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
LINC00941-201ENST00000547804 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.65
LINC00941-201ENST00000547804 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
LINC00941-201ENST00000547804 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
LINC00941-201ENST00000547804 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
LINC00941-201ENST00000547804 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
LINC00941-201ENST00000547804 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.62
LINC00941-201ENST00000547804 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
LINC00941-201ENST00000547804 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
LINC00941-201ENST00000547804 KCNA4P22459 653 aa18.84■□□□□ 0.61
LINC00941-201ENST00000547804 SMARCA4P51532 1647 aa18.83■□□□□ 0.6
LINC00941-201ENST00000547804 MROH2BQ7Z745 1585 aa18.75■□□□□ 0.59
LINC00941-201ENST00000547804 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
LINC00941-201ENST00000547804 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
LINC00941-201ENST00000547804 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
LINC00941-201ENST00000547804 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
LINC00941-201ENST00000547804 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
LINC00941-201ENST00000547804 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
LINC00941-201ENST00000547804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
LINC00941-201ENST00000547804 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
LINC00941-201ENST00000547804 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
LINC00941-201ENST00000547804 WIZO95785 1651 aa18.51■□□□□ 0.55
LINC00941-201ENST00000547804 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
LINC00941-201ENST00000547804 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
LINC00941-201ENST00000547804 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
LINC00941-201ENST00000547804 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
LINC00941-201ENST00000547804 NESP48681 1621 aa18.16■□□□□ 0.5
LINC00941-201ENST00000547804 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
LINC00941-201ENST00000547804 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
LINC00941-201ENST00000547804 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
LINC00941-201ENST00000547804 CFTRP13569 1480 aa18.08■□□□□ 0.49
LINC00941-201ENST00000547804 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
LINC00941-201ENST00000547804 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
LINC00941-201ENST00000547804 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
LINC00941-201ENST00000547804 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
LINC00941-201ENST00000547804 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
LINC00941-201ENST00000547804 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
LINC00941-201ENST00000547804 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
LINC00941-201ENST00000547804 CAPN15O75808 1086 aa17.88■□□□□ 0.45
LINC00941-201ENST00000547804 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
LINC00941-201ENST00000547804 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
LINC00941-201ENST00000547804 PRDM2Q13029 1718 aa17.83■□□□□ 0.45
LINC00941-201ENST00000547804 CUX2O14529 1486 aa17.81■□□□□ 0.44
LINC00941-201ENST00000547804 WDR62O43379 1518 aa17.77■□□□□ 0.44
LINC00941-201ENST00000547804 DSG3P32926 999 aa17.75■□□□□ 0.43
LINC00941-201ENST00000547804 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
LINC00941-201ENST00000547804 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
LINC00941-201ENST00000547804 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
LINC00941-201ENST00000547804 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
LINC00941-201ENST00000547804 TOPBP1Q92547 1522 aa17.65■□□□□ 0.42
LINC00941-201ENST00000547804 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
LINC00941-201ENST00000547804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.41
LINC00941-201ENST00000547804 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.41
LINC00941-201ENST00000547804 CUX1P39880 1505 aa17.58■□□□□ 0.4
LINC00941-201ENST00000547804 ABCB7O75027 752 aa17.55■□□□□ 0.4
LINC00941-201ENST00000547804 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
LINC00941-201ENST00000547804 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
LINC00941-201ENST00000547804 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
LINC00941-201ENST00000547804 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
LINC00941-201ENST00000547804 APLP2Q06481 763 aa17.52■□□□□ 0.4
LINC00941-201ENST00000547804 IFT140Q96RY7 1462 aa17.52■□□□□ 0.39
LINC00941-201ENST00000547804 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
LINC00941-201ENST00000547804 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
LINC00941-201ENST00000547804 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
LINC00941-201ENST00000547804 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
LINC00941-201ENST00000547804 SOGA1O94964 1423 aa17.45■□□□□ 0.38
LINC00941-201ENST00000547804 TARBP1Q13395 1621 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms