RNA–Protein interactions for RNA: ENST00000547697.6

SLC4A8-210, Transcript of solute carrier family 4 member 8, humanhuman

TSL 2

Gene SLC4A8, Length 3,380 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A8-210ENST00000547697 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
SLC4A8-210ENST00000547697 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
SLC4A8-210ENST00000547697 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
SLC4A8-210ENST00000547697 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
SLC4A8-210ENST00000547697 MYO15BQ96JP2 1530 aa25.03■■□□□ 1.6
SLC4A8-210ENST00000547697 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
SLC4A8-210ENST00000547697 NACADO15069 1562 aa24.62■■□□□ 1.53
SLC4A8-210ENST00000547697 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
SLC4A8-210ENST00000547697 HRCP23327 699 aa24.56■■□□□ 1.52
SLC4A8-210ENST00000547697 ABCC9O60706 1549 aa24.42■■□□□ 1.5
SLC4A8-210ENST00000547697 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
SLC4A8-210ENST00000547697 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
SLC4A8-210ENST00000547697 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
SLC4A8-210ENST00000547697 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
SLC4A8-210ENST00000547697 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
SLC4A8-210ENST00000547697 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
SLC4A8-210ENST00000547697 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
SLC4A8-210ENST00000547697 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
SLC4A8-210ENST00000547697 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
SLC4A8-210ENST00000547697 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
SLC4A8-210ENST00000547697 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
SLC4A8-210ENST00000547697 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
SLC4A8-210ENST00000547697 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
SLC4A8-210ENST00000547697 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
SLC4A8-210ENST00000547697 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
SLC4A8-210ENST00000547697 WIZO95785 1651 aa23.37■■□□□ 1.33
SLC4A8-210ENST00000547697 MYT1Q01538 1121 aa23.34■■□□□ 1.33
SLC4A8-210ENST00000547697 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
SLC4A8-210ENST00000547697 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
SLC4A8-210ENST00000547697 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
SLC4A8-210ENST00000547697 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
SLC4A8-210ENST00000547697 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
SLC4A8-210ENST00000547697 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
SLC4A8-210ENST00000547697 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
SLC4A8-210ENST00000547697 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
SLC4A8-210ENST00000547697 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
SLC4A8-210ENST00000547697 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
SLC4A8-210ENST00000547697 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
SLC4A8-210ENST00000547697 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
SLC4A8-210ENST00000547697 ZEB1P37275 1124 aaPredicted RBP22.75■■□□□ 1.23
SLC4A8-210ENST00000547697 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
SLC4A8-210ENST00000547697 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
SLC4A8-210ENST00000547697 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
SLC4A8-210ENST00000547697 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
SLC4A8-210ENST00000547697 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
SLC4A8-210ENST00000547697 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
SLC4A8-210ENST00000547697 EEA1Q15075 1411 aa22.37■■□□□ 1.17
SLC4A8-210ENST00000547697 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
SLC4A8-210ENST00000547697 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
SLC4A8-210ENST00000547697 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
SLC4A8-210ENST00000547697 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
SLC4A8-210ENST00000547697 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
SLC4A8-210ENST00000547697 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
SLC4A8-210ENST00000547697 CFTRP13569 1480 aa22.25■■□□□ 1.15
SLC4A8-210ENST00000547697 DIEXFQ68CQ4 756 aaKnown RBP22.25■■□□□ 1.15
SLC4A8-210ENST00000547697 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
SLC4A8-210ENST00000547697 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
SLC4A8-210ENST00000547697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
SLC4A8-210ENST00000547697 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
SLC4A8-210ENST00000547697 SOGA1O94964 1423 aa22.11■■□□□ 1.13
SLC4A8-210ENST00000547697 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
SLC4A8-210ENST00000547697 KIF21BO75037 1637 aa22.08■■□□□ 1.13
SLC4A8-210ENST00000547697 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.12
SLC4A8-210ENST00000547697 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
SLC4A8-210ENST00000547697 CUX1P39880 1505 aa22.01■■□□□ 1.11
SLC4A8-210ENST00000547697 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
SLC4A8-210ENST00000547697 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
SLC4A8-210ENST00000547697 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
SLC4A8-210ENST00000547697 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
SLC4A8-210ENST00000547697 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
SLC4A8-210ENST00000547697 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
SLC4A8-210ENST00000547697 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
SLC4A8-210ENST00000547697 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
SLC4A8-210ENST00000547697 CEP162Q5TB80 1403 aa21.83■■□□□ 1.08
SLC4A8-210ENST00000547697 PRXQ9BXM0 1461 aa21.78■■□□□ 1.08
SLC4A8-210ENST00000547697 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
SLC4A8-210ENST00000547697 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
SLC4A8-210ENST00000547697 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
SLC4A8-210ENST00000547697 KIF27Q86VH2 1401 aa21.75■■□□□ 1.07
SLC4A8-210ENST00000547697 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
SLC4A8-210ENST00000547697 MIER1Q8N108 512 aa21.67■■□□□ 1.06
SLC4A8-210ENST00000547697 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
SLC4A8-210ENST00000547697 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
SLC4A8-210ENST00000547697 ZNF316A6NFI3 1004 aaPredicted RBP21.6■■□□□ 1.05
SLC4A8-210ENST00000547697 NESP48681 1621 aa21.59■■□□□ 1.05
SLC4A8-210ENST00000547697 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
SLC4A8-210ENST00000547697 PRKCSHP14314 528 aaPredicted RBP21.59■■□□□ 1.05
SLC4A8-210ENST00000547697 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.05
SLC4A8-210ENST00000547697 WDR97A6NE52 1622 aa21.58■■□□□ 1.05
SLC4A8-210ENST00000547697 PDS5BQ9NTI5 1447 aa21.57■■□□□ 1.04
SLC4A8-210ENST00000547697 CLIP1P30622 1438 aa21.56■■□□□ 1.04
SLC4A8-210ENST00000547697 CUX2O14529 1486 aa21.55■■□□□ 1.04
SLC4A8-210ENST00000547697 TSHZ2Q9NRE2 1034 aa21.52■■□□□ 1.04
SLC4A8-210ENST00000547697 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
SLC4A8-210ENST00000547697 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
SLC4A8-210ENST00000547697 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SLC4A8-210ENST00000547697 IGF1RP08069 1367 aa21.49■■□□□ 1.03
SLC4A8-210ENST00000547697 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
SLC4A8-210ENST00000547697 SUPT16HQ9Y5B9 1047 aaKnown RBP21.48■■□□□ 1.03
SLC4A8-210ENST00000547697 CUL7Q14999 1698 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms