RNA–Protein interactions for RNA: ENST00000547685.5

MMP19-205, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-205ENST00000547685 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
MMP19-205ENST00000547685 HRCP23327 699 aa23.38■■□□□ 1.33
MMP19-205ENST00000547685 PELP1Q8IZL8 1130 aaKnown RBP23.38■■□□□ 1.33
MMP19-205ENST00000547685 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
MMP19-205ENST00000547685 ABCC9O60706 1549 aa22.81■■□□□ 1.24
MMP19-205ENST00000547685 MYT1Q01538 1121 aa22.76■■□□□ 1.23
MMP19-205ENST00000547685 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
MMP19-205ENST00000547685 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.18
MMP19-205ENST00000547685 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
MMP19-205ENST00000547685 MYO15BQ96JP2 1530 aa22.35■■□□□ 1.17
MMP19-205ENST00000547685 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
MMP19-205ENST00000547685 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
MMP19-205ENST00000547685 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
MMP19-205ENST00000547685 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
MMP19-205ENST00000547685 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
MMP19-205ENST00000547685 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
MMP19-205ENST00000547685 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
MMP19-205ENST00000547685 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
MMP19-205ENST00000547685 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
MMP19-205ENST00000547685 NACADO15069 1562 aa21.77■■□□□ 1.08
MMP19-205ENST00000547685 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
MMP19-205ENST00000547685 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
MMP19-205ENST00000547685 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
MMP19-205ENST00000547685 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
MMP19-205ENST00000547685 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.02
MMP19-205ENST00000547685 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
MMP19-205ENST00000547685 NEUROD1Q13562 356 aa21.32■■□□□ 1
MMP19-205ENST00000547685 SCRIBQ14160 1630 aa21.3■■□□□ 1
MMP19-205ENST00000547685 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
MMP19-205ENST00000547685 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
MMP19-205ENST00000547685 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
MMP19-205ENST00000547685 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
MMP19-205ENST00000547685 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
MMP19-205ENST00000547685 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
MMP19-205ENST00000547685 CCER1Q8TC90 406 aaPredicted RBP20.87■□□□□ 0.93
MMP19-205ENST00000547685 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
MMP19-205ENST00000547685 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
MMP19-205ENST00000547685 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
MMP19-205ENST00000547685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
MMP19-205ENST00000547685 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
MMP19-205ENST00000547685 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
MMP19-205ENST00000547685 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
MMP19-205ENST00000547685 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
MMP19-205ENST00000547685 ANP32EQ9BTT0 268 aa20.57■□□□□ 0.88
MMP19-205ENST00000547685 BCL11AQ9H165 835 aa20.51■□□□□ 0.87
MMP19-205ENST00000547685 WIZO95785 1651 aa20.48■□□□□ 0.87
MMP19-205ENST00000547685 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
MMP19-205ENST00000547685 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
MMP19-205ENST00000547685 MIER1Q8N108 512 aa20.36■□□□□ 0.85
MMP19-205ENST00000547685 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
MMP19-205ENST00000547685 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
MMP19-205ENST00000547685 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
MMP19-205ENST00000547685 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
MMP19-205ENST00000547685 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
MMP19-205ENST00000547685 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
MMP19-205ENST00000547685 ATAD2BQ9ULI0 1458 aa20.15■□□□□ 0.82
MMP19-205ENST00000547685 EEA1Q15075 1411 aa20.15■□□□□ 0.82
MMP19-205ENST00000547685 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.81
MMP19-205ENST00000547685 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
MMP19-205ENST00000547685 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
MMP19-205ENST00000547685 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
MMP19-205ENST00000547685 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
MMP19-205ENST00000547685 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
MMP19-205ENST00000547685 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
MMP19-205ENST00000547685 MYT1LQ9UL68 1186 aa20■□□□□ 0.79
MMP19-205ENST00000547685 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
MMP19-205ENST00000547685 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
MMP19-205ENST00000547685 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
MMP19-205ENST00000547685 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
MMP19-205ENST00000547685 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
MMP19-205ENST00000547685 RBM19Q9Y4C8 960 aaKnown RBP19.78■□□□□ 0.76
MMP19-205ENST00000547685 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.76
MMP19-205ENST00000547685 NESP48681 1621 aa19.75■□□□□ 0.75
MMP19-205ENST00000547685 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
MMP19-205ENST00000547685 KIF21BO75037 1637 aa19.73■□□□□ 0.75
MMP19-205ENST00000547685 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
MMP19-205ENST00000547685 NEFLP07196 543 aa19.71■□□□□ 0.75
MMP19-205ENST00000547685 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
MMP19-205ENST00000547685 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
MMP19-205ENST00000547685 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
MMP19-205ENST00000547685 SOGA1O94964 1423 aa19.66■□□□□ 0.74
MMP19-205ENST00000547685 ERCC6Q03468 1493 aa19.65■□□□□ 0.74
MMP19-205ENST00000547685 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
MMP19-205ENST00000547685 FKBP8Q14318 412 aa19.63■□□□□ 0.73
MMP19-205ENST00000547685 CUX2O14529 1486 aa19.62■□□□□ 0.73
MMP19-205ENST00000547685 APLP2Q06481 763 aa19.61■□□□□ 0.73
MMP19-205ENST00000547685 CLIP1P30622 1438 aa19.6■□□□□ 0.73
MMP19-205ENST00000547685 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
MMP19-205ENST00000547685 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
MMP19-205ENST00000547685 CCER2I3L3R5 266 aa19.53■□□□□ 0.72
MMP19-205ENST00000547685 ERICH6BQ5W0A0 696 aa19.52■□□□□ 0.72
MMP19-205ENST00000547685 SYNJ1O43426 1573 aa19.5■□□□□ 0.71
MMP19-205ENST00000547685 MSH5O43196 834 aa19.49■□□□□ 0.71
MMP19-205ENST00000547685 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
MMP19-205ENST00000547685 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
MMP19-205ENST00000547685 BCANQ96GW7 911 aa19.46■□□□□ 0.71
MMP19-205ENST00000547685 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
MMP19-205ENST00000547685 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
MMP19-205ENST00000547685 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
MMP19-205ENST00000547685 CFTRP13569 1480 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms