RNA–Protein interactions for RNA: ENST00000547556.1

IKZF4-204, Transcript of IKAROS family zinc finger 4, humanhuman

TSL 3

Gene IKZF4, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKZF4-204ENST00000547556 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
IKZF4-204ENST00000547556 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
IKZF4-204ENST00000547556 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
IKZF4-204ENST00000547556 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
IKZF4-204ENST00000547556 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
IKZF4-204ENST00000547556 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
IKZF4-204ENST00000547556 FOXD1Q16676 465 aa18.35■□□□□ 0.53
IKZF4-204ENST00000547556 ADRA2BP18089 450 aa18.06■□□□□ 0.48
IKZF4-204ENST00000547556 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
IKZF4-204ENST00000547556 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
IKZF4-204ENST00000547556 ABCC9O60706 1549 aa17.26■□□□□ 0.35
IKZF4-204ENST00000547556 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
IKZF4-204ENST00000547556 KCNA4P22459 653 aa17.08■□□□□ 0.32
IKZF4-204ENST00000547556 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
IKZF4-204ENST00000547556 MSH5O43196 834 aa16.67■□□□□ 0.26
IKZF4-204ENST00000547556 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
IKZF4-204ENST00000547556 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
IKZF4-204ENST00000547556 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
IKZF4-204ENST00000547556 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
IKZF4-204ENST00000547556 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
IKZF4-204ENST00000547556 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
IKZF4-204ENST00000547556 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
IKZF4-204ENST00000547556 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
IKZF4-204ENST00000547556 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
IKZF4-204ENST00000547556 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
IKZF4-204ENST00000547556 NACADO15069 1562 aa16.17■□□□□ 0.18
IKZF4-204ENST00000547556 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
IKZF4-204ENST00000547556 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
IKZF4-204ENST00000547556 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
IKZF4-204ENST00000547556 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
IKZF4-204ENST00000547556 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
IKZF4-204ENST00000547556 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
IKZF4-204ENST00000547556 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
IKZF4-204ENST00000547556 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
IKZF4-204ENST00000547556 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
IKZF4-204ENST00000547556 ZBTB22O15209 634 aa15.74■□□□□ 0.11
IKZF4-204ENST00000547556 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
IKZF4-204ENST00000547556 DCAF1Q9Y4B6 1507 aa15.67■□□□□ 0.1
IKZF4-204ENST00000547556 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
IKZF4-204ENST00000547556 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
IKZF4-204ENST00000547556 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
IKZF4-204ENST00000547556 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
IKZF4-204ENST00000547556 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
IKZF4-204ENST00000547556 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
IKZF4-204ENST00000547556 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
IKZF4-204ENST00000547556 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
IKZF4-204ENST00000547556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
IKZF4-204ENST00000547556 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
IKZF4-204ENST00000547556 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
IKZF4-204ENST00000547556 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
IKZF4-204ENST00000547556 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
IKZF4-204ENST00000547556 NESP48681 1621 aa14.86□□□□□ -0.03
IKZF4-204ENST00000547556 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
IKZF4-204ENST00000547556 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
IKZF4-204ENST00000547556 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
IKZF4-204ENST00000547556 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
IKZF4-204ENST00000547556 DNAJC5Q9H3Z4 198 aa14.81□□□□□ -0.04
IKZF4-204ENST00000547556 KIF21AQ7Z4S6 1674 aa14.8□□□□□ -0.04
IKZF4-204ENST00000547556 CUX2O14529 1486 aa14.79□□□□□ -0.04
IKZF4-204ENST00000547556 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
IKZF4-204ENST00000547556 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
IKZF4-204ENST00000547556 MROH2BQ7Z745 1585 aa14.76□□□□□ -0.05
IKZF4-204ENST00000547556 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
IKZF4-204ENST00000547556 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
IKZF4-204ENST00000547556 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
IKZF4-204ENST00000547556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
IKZF4-204ENST00000547556 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
IKZF4-204ENST00000547556 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
IKZF4-204ENST00000547556 WIZO95785 1651 aa14.68□□□□□ -0.06
IKZF4-204ENST00000547556 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
IKZF4-204ENST00000547556 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
IKZF4-204ENST00000547556 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
IKZF4-204ENST00000547556 FKBP8Q14318 412 aa14.44□□□□□ -0.1
IKZF4-204ENST00000547556 WDR62O43379 1518 aa14.44□□□□□ -0.1
IKZF4-204ENST00000547556 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
IKZF4-204ENST00000547556 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
IKZF4-204ENST00000547556 APLP2Q06481 763 aa14.42□□□□□ -0.1
IKZF4-204ENST00000547556 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
IKZF4-204ENST00000547556 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
IKZF4-204ENST00000547556 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
IKZF4-204ENST00000547556 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
IKZF4-204ENST00000547556 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
IKZF4-204ENST00000547556 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
IKZF4-204ENST00000547556 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
IKZF4-204ENST00000547556 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
IKZF4-204ENST00000547556 CFTRP13569 1480 aa14.29□□□□□ -0.12
IKZF4-204ENST00000547556 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
IKZF4-204ENST00000547556 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
IKZF4-204ENST00000547556 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
IKZF4-204ENST00000547556 CAPN15O75808 1086 aa14.2□□□□□ -0.14
IKZF4-204ENST00000547556 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
IKZF4-204ENST00000547556 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
IKZF4-204ENST00000547556 ZNF608Q9ULD9 1512 aaPredicted RBP14.13□□□□□ -0.15
IKZF4-204ENST00000547556 CHD1O14646 1710 aa14.12□□□□□ -0.15
IKZF4-204ENST00000547556 POLA2Q14181 598 aa14.12□□□□□ -0.15
IKZF4-204ENST00000547556 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
IKZF4-204ENST00000547556 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
IKZF4-204ENST00000547556 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
IKZF4-204ENST00000547556 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
IKZF4-204ENST00000547556 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms