RNA–Protein interactions for RNA: ENST00000547233.1

TGIF1-210, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 5

Gene TGIF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-210ENST00000547233 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
TGIF1-210ENST00000547233 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
TGIF1-210ENST00000547233 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
TGIF1-210ENST00000547233 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
TGIF1-210ENST00000547233 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
TGIF1-210ENST00000547233 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
TGIF1-210ENST00000547233 FOXD1Q16676 465 aa17.78■□□□□ 0.44
TGIF1-210ENST00000547233 MSH5O43196 834 aa17.1■□□□□ 0.33
TGIF1-210ENST00000547233 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
TGIF1-210ENST00000547233 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
TGIF1-210ENST00000547233 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
TGIF1-210ENST00000547233 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
TGIF1-210ENST00000547233 ADRA2BP18089 450 aa15.73■□□□□ 0.11
TGIF1-210ENST00000547233 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
TGIF1-210ENST00000547233 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
TGIF1-210ENST00000547233 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
TGIF1-210ENST00000547233 ABCC9O60706 1549 aa15.48■□□□□ 0.07
TGIF1-210ENST00000547233 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
TGIF1-210ENST00000547233 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.04
TGIF1-210ENST00000547233 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
TGIF1-210ENST00000547233 NACADO15069 1562 aa15.24■□□□□ 0.03
TGIF1-210ENST00000547233 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
TGIF1-210ENST00000547233 SCRIBQ14160 1630 aa15.06■□□□□ 0
TGIF1-210ENST00000547233 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
TGIF1-210ENST00000547233 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
TGIF1-210ENST00000547233 UNC13AQ9UPW8 1703 aa14.79□□□□□ -0.04
TGIF1-210ENST00000547233 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
TGIF1-210ENST00000547233 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
TGIF1-210ENST00000547233 BICRAQ9NZM4 1560 aa14.65□□□□□ -0.06
TGIF1-210ENST00000547233 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
TGIF1-210ENST00000547233 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
TGIF1-210ENST00000547233 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
TGIF1-210ENST00000547233 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
TGIF1-210ENST00000547233 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
TGIF1-210ENST00000547233 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
TGIF1-210ENST00000547233 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
TGIF1-210ENST00000547233 WIZO95785 1651 aa14.43□□□□□ -0.1
TGIF1-210ENST00000547233 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
TGIF1-210ENST00000547233 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
TGIF1-210ENST00000547233 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
TGIF1-210ENST00000547233 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
TGIF1-210ENST00000547233 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
TGIF1-210ENST00000547233 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
TGIF1-210ENST00000547233 POTEHQ6S545 545 aa14.18□□□□□ -0.14
TGIF1-210ENST00000547233 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
TGIF1-210ENST00000547233 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
TGIF1-210ENST00000547233 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
TGIF1-210ENST00000547233 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
TGIF1-210ENST00000547233 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
TGIF1-210ENST00000547233 TRIM41Q8WV44 630 aa14□□□□□ -0.17
TGIF1-210ENST00000547233 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
TGIF1-210ENST00000547233 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
TGIF1-210ENST00000547233 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
TGIF1-210ENST00000547233 CFTRP13569 1480 aa13.77□□□□□ -0.21
TGIF1-210ENST00000547233 LOC105371045A0A1W2PR82 267 aa13.76□□□□□ -0.21
TGIF1-210ENST00000547233 FAM9AQ8IZU1 332 aaPredicted RBP13.76□□□□□ -0.21
TGIF1-210ENST00000547233 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
TGIF1-210ENST00000547233 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
TGIF1-210ENST00000547233 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
TGIF1-210ENST00000547233 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
TGIF1-210ENST00000547233 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
TGIF1-210ENST00000547233 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
TGIF1-210ENST00000547233 SOGA1O94964 1423 aa13.62□□□□□ -0.23
TGIF1-210ENST00000547233 NESP48681 1621 aa13.61□□□□□ -0.23
TGIF1-210ENST00000547233 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
TGIF1-210ENST00000547233 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
TGIF1-210ENST00000547233 CUX1P39880 1505 aa13.59□□□□□ -0.23
TGIF1-210ENST00000547233 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
TGIF1-210ENST00000547233 EEA1Q15075 1411 aa13.58□□□□□ -0.24
TGIF1-210ENST00000547233 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
TGIF1-210ENST00000547233 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
TGIF1-210ENST00000547233 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
TGIF1-210ENST00000547233 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
TGIF1-210ENST00000547233 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
TGIF1-210ENST00000547233 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
TGIF1-210ENST00000547233 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
TGIF1-210ENST00000547233 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
TGIF1-210ENST00000547233 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
TGIF1-210ENST00000547233 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
TGIF1-210ENST00000547233 TOPBP1Q92547 1522 aa13.43□□□□□ -0.26
TGIF1-210ENST00000547233 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
TGIF1-210ENST00000547233 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
TGIF1-210ENST00000547233 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
TGIF1-210ENST00000547233 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
TGIF1-210ENST00000547233 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
TGIF1-210ENST00000547233 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
TGIF1-210ENST00000547233 KIF21BO75037 1637 aa13.38□□□□□ -0.27
TGIF1-210ENST00000547233 CUX2O14529 1486 aa13.36□□□□□ -0.27
TGIF1-210ENST00000547233 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
TGIF1-210ENST00000547233 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
TGIF1-210ENST00000547233 IGF1RP08069 1367 aa13.32□□□□□ -0.28
TGIF1-210ENST00000547233 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
TGIF1-210ENST00000547233 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
TGIF1-210ENST00000547233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
TGIF1-210ENST00000547233 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
TGIF1-210ENST00000547233 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
TGIF1-210ENST00000547233 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
TGIF1-210ENST00000547233 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
TGIF1-210ENST00000547233 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
TGIF1-210ENST00000547233 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms