RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
RIMKLB-212ENST00000544257 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
RIMKLB-212ENST00000544257 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
RIMKLB-212ENST00000544257 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
RIMKLB-212ENST00000544257 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
RIMKLB-212ENST00000544257 FOXD1Q16676 465 aa21.92■■□□□ 1.1
RIMKLB-212ENST00000544257 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
RIMKLB-212ENST00000544257 POTEDQ86YR6 584 aa21.27■□□□□ 0.99
RIMKLB-212ENST00000544257 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
RIMKLB-212ENST00000544257 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
RIMKLB-212ENST00000544257 ADRA2BP18089 450 aa20.72■□□□□ 0.91
RIMKLB-212ENST00000544257 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
RIMKLB-212ENST00000544257 MSH5O43196 834 aa20.42■□□□□ 0.86
RIMKLB-212ENST00000544257 ABCC9O60706 1549 aa20.21■□□□□ 0.83
RIMKLB-212ENST00000544257 NACADO15069 1562 aa19.56■□□□□ 0.72
RIMKLB-212ENST00000544257 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
RIMKLB-212ENST00000544257 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
RIMKLB-212ENST00000544257 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
RIMKLB-212ENST00000544257 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
RIMKLB-212ENST00000544257 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
RIMKLB-212ENST00000544257 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
RIMKLB-212ENST00000544257 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
RIMKLB-212ENST00000544257 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
RIMKLB-212ENST00000544257 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
RIMKLB-212ENST00000544257 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
RIMKLB-212ENST00000544257 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
RIMKLB-212ENST00000544257 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
RIMKLB-212ENST00000544257 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
RIMKLB-212ENST00000544257 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
RIMKLB-212ENST00000544257 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
RIMKLB-212ENST00000544257 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
RIMKLB-212ENST00000544257 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
RIMKLB-212ENST00000544257 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
RIMKLB-212ENST00000544257 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
RIMKLB-212ENST00000544257 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
RIMKLB-212ENST00000544257 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
RIMKLB-212ENST00000544257 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
RIMKLB-212ENST00000544257 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
RIMKLB-212ENST00000544257 RNF216Q9NWF9 866 aaPredicted RBP18.13■□□□□ 0.49
RIMKLB-212ENST00000544257 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
RIMKLB-212ENST00000544257 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
RIMKLB-212ENST00000544257 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
RIMKLB-212ENST00000544257 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
RIMKLB-212ENST00000544257 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
RIMKLB-212ENST00000544257 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
RIMKLB-212ENST00000544257 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
RIMKLB-212ENST00000544257 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
RIMKLB-212ENST00000544257 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
RIMKLB-212ENST00000544257 KCNA4P22459 653 aa17.87■□□□□ 0.45
RIMKLB-212ENST00000544257 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
RIMKLB-212ENST00000544257 WIZO95785 1651 aa17.83■□□□□ 0.44
RIMKLB-212ENST00000544257 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
RIMKLB-212ENST00000544257 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
RIMKLB-212ENST00000544257 NESP48681 1621 aa17.51■□□□□ 0.39
RIMKLB-212ENST00000544257 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
RIMKLB-212ENST00000544257 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
RIMKLB-212ENST00000544257 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
RIMKLB-212ENST00000544257 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
RIMKLB-212ENST00000544257 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
RIMKLB-212ENST00000544257 CFTRP13569 1480 aa17.42■□□□□ 0.38
RIMKLB-212ENST00000544257 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
RIMKLB-212ENST00000544257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.376e-6■□□□□ 9.5
RIMKLB-212ENST00000544257 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
RIMKLB-212ENST00000544257 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
RIMKLB-212ENST00000544257 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
RIMKLB-212ENST00000544257 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
RIMKLB-212ENST00000544257 CUX2O14529 1486 aa17.28■□□□□ 0.36
RIMKLB-212ENST00000544257 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
RIMKLB-212ENST00000544257 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
RIMKLB-212ENST00000544257 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
RIMKLB-212ENST00000544257 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
RIMKLB-212ENST00000544257 WDR62O43379 1518 aa17.19■□□□□ 0.34
RIMKLB-212ENST00000544257 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
RIMKLB-212ENST00000544257 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
RIMKLB-212ENST00000544257 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
RIMKLB-212ENST00000544257 TOPBP1Q92547 1522 aa17.02■□□□□ 0.32
RIMKLB-212ENST00000544257 SLC4A2P04920 1241 aa17.02■□□□□ 0.31
RIMKLB-212ENST00000544257 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
RIMKLB-212ENST00000544257 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
RIMKLB-212ENST00000544257 CUX1P39880 1505 aa16.91■□□□□ 0.3
RIMKLB-212ENST00000544257 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
RIMKLB-212ENST00000544257 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
RIMKLB-212ENST00000544257 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
RIMKLB-212ENST00000544257 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
RIMKLB-212ENST00000544257 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
RIMKLB-212ENST00000544257 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
RIMKLB-212ENST00000544257 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
RIMKLB-212ENST00000544257 SOGA1O94964 1423 aa16.8■□□□□ 0.28
RIMKLB-212ENST00000544257 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
RIMKLB-212ENST00000544257 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
RIMKLB-212ENST00000544257 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
RIMKLB-212ENST00000544257 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.27
RIMKLB-212ENST00000544257 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
RIMKLB-212ENST00000544257 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
RIMKLB-212ENST00000544257 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
RIMKLB-212ENST00000544257 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
RIMKLB-212ENST00000544257 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
RIMKLB-212ENST00000544257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
RIMKLB-212ENST00000544257 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
RIMKLB-212ENST00000544257 CAPN15O75808 1086 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms