RNA–Protein interactions for RNA: ENST00000543797.5

C2CD5-215, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 4

Gene C2CD5, Length 842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-215ENST00000543797 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
C2CD5-215ENST00000543797 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
C2CD5-215ENST00000543797 NISCHQ9Y2I1 1504 aa19.38■□□□□ 0.69
C2CD5-215ENST00000543797 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
C2CD5-215ENST00000543797 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
C2CD5-215ENST00000543797 ABCC9O60706 1549 aa17.49■□□□□ 0.39
C2CD5-215ENST00000543797 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.38
C2CD5-215ENST00000543797 FOXD1Q16676 465 aa17.23■□□□□ 0.35
C2CD5-215ENST00000543797 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
C2CD5-215ENST00000543797 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
C2CD5-215ENST00000543797 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
C2CD5-215ENST00000543797 NACADO15069 1562 aa16.47■□□□□ 0.23
C2CD5-215ENST00000543797 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
C2CD5-215ENST00000543797 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
C2CD5-215ENST00000543797 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
C2CD5-215ENST00000543797 ADRA2BP18089 450 aa16.29■□□□□ 0.2
C2CD5-215ENST00000543797 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
C2CD5-215ENST00000543797 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
C2CD5-215ENST00000543797 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
C2CD5-215ENST00000543797 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
C2CD5-215ENST00000543797 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
C2CD5-215ENST00000543797 MSH5O43196 834 aa15.99■□□□□ 0.15
C2CD5-215ENST00000543797 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
C2CD5-215ENST00000543797 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
C2CD5-215ENST00000543797 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
C2CD5-215ENST00000543797 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
C2CD5-215ENST00000543797 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
C2CD5-215ENST00000543797 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
C2CD5-215ENST00000543797 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
C2CD5-215ENST00000543797 KCNA4P22459 653 aa15.35■□□□□ 0.05
C2CD5-215ENST00000543797 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
C2CD5-215ENST00000543797 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
C2CD5-215ENST00000543797 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
C2CD5-215ENST00000543797 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
C2CD5-215ENST00000543797 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
C2CD5-215ENST00000543797 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
C2CD5-215ENST00000543797 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
C2CD5-215ENST00000543797 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
C2CD5-215ENST00000543797 CUX2O14529 1486 aa15.08■□□□□ 0
C2CD5-215ENST00000543797 BAZ1AQ9NRL2 1556 aaPredicted RBP15.05■□□□□ -0
C2CD5-215ENST00000543797 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
C2CD5-215ENST00000543797 NESP48681 1621 aa15□□□□□ -0.01
C2CD5-215ENST00000543797 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
C2CD5-215ENST00000543797 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
C2CD5-215ENST00000543797 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
C2CD5-215ENST00000543797 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
C2CD5-215ENST00000543797 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
C2CD5-215ENST00000543797 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
C2CD5-215ENST00000543797 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
C2CD5-215ENST00000543797 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
C2CD5-215ENST00000543797 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
C2CD5-215ENST00000543797 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
C2CD5-215ENST00000543797 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
C2CD5-215ENST00000543797 WIZO95785 1651 aa14.76□□□□□ -0.05
C2CD5-215ENST00000543797 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
C2CD5-215ENST00000543797 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
C2CD5-215ENST00000543797 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
C2CD5-215ENST00000543797 CSRNP3Q8WYN3 585 aa14.64□□□□□ -0.07
C2CD5-215ENST00000543797 WDR62O43379 1518 aa14.63□□□□□ -0.07
C2CD5-215ENST00000543797 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
C2CD5-215ENST00000543797 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
C2CD5-215ENST00000543797 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
C2CD5-215ENST00000543797 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
C2CD5-215ENST00000543797 CFTRP13569 1480 aa14.56□□□□□ -0.08
C2CD5-215ENST00000543797 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
C2CD5-215ENST00000543797 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
C2CD5-215ENST00000543797 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
C2CD5-215ENST00000543797 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
C2CD5-215ENST00000543797 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
C2CD5-215ENST00000543797 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
C2CD5-215ENST00000543797 PRDM2Q13029 1718 aa14.41□□□□□ -0.1
C2CD5-215ENST00000543797 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
C2CD5-215ENST00000543797 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
C2CD5-215ENST00000543797 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
C2CD5-215ENST00000543797 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
C2CD5-215ENST00000543797 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
C2CD5-215ENST00000543797 DNMBPQ6XZF7 1577 aa14.24□□□□□ -0.13
C2CD5-215ENST00000543797 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
C2CD5-215ENST00000543797 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
C2CD5-215ENST00000543797 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
C2CD5-215ENST00000543797 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
C2CD5-215ENST00000543797 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
C2CD5-215ENST00000543797 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
C2CD5-215ENST00000543797 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
C2CD5-215ENST00000543797 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
C2CD5-215ENST00000543797 POLA1P09884 1462 aaPredicted RBP14.15□□□□□ -0.14
C2CD5-215ENST00000543797 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
C2CD5-215ENST00000543797 FBLN2P98095 1184 aa14.15□□□□□ -0.14
C2CD5-215ENST00000543797 CHD1O14646 1710 aa14.12□□□□□ -0.15
C2CD5-215ENST00000543797 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
C2CD5-215ENST00000543797 SOGA1O94964 1423 aa14.1□□□□□ -0.15
C2CD5-215ENST00000543797 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
C2CD5-215ENST00000543797 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
C2CD5-215ENST00000543797 ZBTB22O15209 634 aa14.07□□□□□ -0.16
C2CD5-215ENST00000543797 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
C2CD5-215ENST00000543797 CUX1P39880 1505 aa14.03□□□□□ -0.16
C2CD5-215ENST00000543797 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.16
C2CD5-215ENST00000543797 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
C2CD5-215ENST00000543797 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
C2CD5-215ENST00000543797 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms