RNA–Protein interactions for RNA: ENST00000542200.2

AP3B2-209, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2 BASIC

Gene AP3B2, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-209ENST00000542200 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
AP3B2-209ENST00000542200 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
AP3B2-209ENST00000542200 DCAF8L2P0C7V8 631 aa17.35■□□□□ 0.37
AP3B2-209ENST00000542200 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
AP3B2-209ENST00000542200 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
AP3B2-209ENST00000542200 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
AP3B2-209ENST00000542200 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
AP3B2-209ENST00000542200 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
AP3B2-209ENST00000542200 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
AP3B2-209ENST00000542200 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
AP3B2-209ENST00000542200 ABCC9O60706 1549 aa16.36■□□□□ 0.21
AP3B2-209ENST00000542200 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
AP3B2-209ENST00000542200 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
AP3B2-209ENST00000542200 NACADO15069 1562 aa16.09■□□□□ 0.17
AP3B2-209ENST00000542200 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
AP3B2-209ENST00000542200 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
AP3B2-209ENST00000542200 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
AP3B2-209ENST00000542200 FAM9AQ8IZU1 332 aaPredicted RBP15.99■□□□□ 0.15
AP3B2-209ENST00000542200 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
AP3B2-209ENST00000542200 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
AP3B2-209ENST00000542200 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
AP3B2-209ENST00000542200 HRCP23327 699 aa15.9■□□□□ 0.14
AP3B2-209ENST00000542200 AEBP2Q6ZN18 517 aaPredicted RBP15.85■□□□□ 0.13
AP3B2-209ENST00000542200 WIZO95785 1651 aa15.8■□□□□ 0.12
AP3B2-209ENST00000542200 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
AP3B2-209ENST00000542200 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
AP3B2-209ENST00000542200 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
AP3B2-209ENST00000542200 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
AP3B2-209ENST00000542200 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
AP3B2-209ENST00000542200 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
AP3B2-209ENST00000542200 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
AP3B2-209ENST00000542200 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
AP3B2-209ENST00000542200 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
AP3B2-209ENST00000542200 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
AP3B2-209ENST00000542200 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
AP3B2-209ENST00000542200 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
AP3B2-209ENST00000542200 TTBK1Q5TCY1 1321 aaPredicted RBP15.38■□□□□ 0.05
AP3B2-209ENST00000542200 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
AP3B2-209ENST00000542200 SOGA1O94964 1423 aa15.33■□□□□ 0.05
AP3B2-209ENST00000542200 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
AP3B2-209ENST00000542200 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
AP3B2-209ENST00000542200 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
AP3B2-209ENST00000542200 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
AP3B2-209ENST00000542200 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
AP3B2-209ENST00000542200 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
AP3B2-209ENST00000542200 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
AP3B2-209ENST00000542200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
AP3B2-209ENST00000542200 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
AP3B2-209ENST00000542200 EEA1Q15075 1411 aa15.17■□□□□ 0.02
AP3B2-209ENST00000542200 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
AP3B2-209ENST00000542200 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
AP3B2-209ENST00000542200 RANGAP1P46060 587 aaPredicted RBP15.16■□□□□ 0.02
AP3B2-209ENST00000542200 GOLGA3Q08378 1498 aa15.1■□□□□ 0.01
AP3B2-209ENST00000542200 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
AP3B2-209ENST00000542200 CEP164Q9UPV0 1460 aa15.02□□□□□ -0.01
AP3B2-209ENST00000542200 APLP2Q06481 763 aa14.99□□□□□ -0.01
AP3B2-209ENST00000542200 CLIP1P30622 1438 aa14.97□□□□□ -0.01
AP3B2-209ENST00000542200 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
AP3B2-209ENST00000542200 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
AP3B2-209ENST00000542200 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
AP3B2-209ENST00000542200 KIF21BO75037 1637 aa14.9□□□□□ -0.02
AP3B2-209ENST00000542200 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
AP3B2-209ENST00000542200 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
AP3B2-209ENST00000542200 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
AP3B2-209ENST00000542200 CUX1P39880 1505 aa14.8□□□□□ -0.04
AP3B2-209ENST00000542200 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
AP3B2-209ENST00000542200 CFTRP13569 1480 aa14.78□□□□□ -0.04
AP3B2-209ENST00000542200 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
AP3B2-209ENST00000542200 DIEXFQ68CQ4 756 aaKnown RBP14.75□□□□□ -0.05
AP3B2-209ENST00000542200 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
AP3B2-209ENST00000542200 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
AP3B2-209ENST00000542200 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
AP3B2-209ENST00000542200 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
AP3B2-209ENST00000542200 CUX2O14529 1486 aa14.68□□□□□ -0.06
AP3B2-209ENST00000542200 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
AP3B2-209ENST00000542200 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
AP3B2-209ENST00000542200 ITGAEP38570 1179 aa14.64□□□□□ -0.07
AP3B2-209ENST00000542200 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
AP3B2-209ENST00000542200 IGF1RP08069 1367 aa14.62□□□□□ -0.07
AP3B2-209ENST00000542200 ATP1B4Q9UN42 357 aaPredicted RBP14.61□□□□□ -0.07
AP3B2-209ENST00000542200 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
AP3B2-209ENST00000542200 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
AP3B2-209ENST00000542200 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
AP3B2-209ENST00000542200 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
AP3B2-209ENST00000542200 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
AP3B2-209ENST00000542200 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
AP3B2-209ENST00000542200 NEUROD1Q13562 356 aa14.52□□□□□ -0.08
AP3B2-209ENST00000542200 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
AP3B2-209ENST00000542200 YTHDC1Q96MU7 727 aaKnown RBP14.51□□□□□ -0.09
AP3B2-209ENST00000542200 NESP48681 1621 aa14.51□□□□□ -0.09
AP3B2-209ENST00000542200 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
AP3B2-209ENST00000542200 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
AP3B2-209ENST00000542200 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
AP3B2-209ENST00000542200 CCNB3Q8WWL7 1395 aa14.48□□□□□ -0.09
AP3B2-209ENST00000542200 DHX57Q6P158 1386 aaKnown RBP14.46□□□□□ -0.1
AP3B2-209ENST00000542200 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
AP3B2-209ENST00000542200 RRBP1Q9P2E9 1410 aaKnown RBP14.44□□□□□ -0.1
AP3B2-209ENST00000542200 MIER1Q8N108 512 aa14.44□□□□□ -0.1
AP3B2-209ENST00000542200 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
AP3B2-209ENST00000542200 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms