RNA–Protein interactions for RNA: ENST00000541935.5

EMP1-208, Transcript of epithelial membrane protein 1, humanhuman

TSL 2

Gene EMP1, Length 521 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-208ENST00000541935 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
EMP1-208ENST00000541935 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
EMP1-208ENST00000541935 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
EMP1-208ENST00000541935 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
EMP1-208ENST00000541935 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
EMP1-208ENST00000541935 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
EMP1-208ENST00000541935 FOXD1Q16676 465 aa19.49■□□□□ 0.71
EMP1-208ENST00000541935 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
EMP1-208ENST00000541935 ADRA2BP18089 450 aa18.97■□□□□ 0.63
EMP1-208ENST00000541935 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
EMP1-208ENST00000541935 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
EMP1-208ENST00000541935 PIAS4Q8N2W9 510 aaPredicted RBP18.44■□□□□ 0.54
EMP1-208ENST00000541935 MSH5O43196 834 aa17.91■□□□□ 0.46
EMP1-208ENST00000541935 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
EMP1-208ENST00000541935 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
EMP1-208ENST00000541935 KCNA4P22459 653 aa17.79■□□□□ 0.44
EMP1-208ENST00000541935 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
EMP1-208ENST00000541935 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
EMP1-208ENST00000541935 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
EMP1-208ENST00000541935 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
EMP1-208ENST00000541935 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
EMP1-208ENST00000541935 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
EMP1-208ENST00000541935 ABCC9O60706 1549 aa17.29■□□□□ 0.36
EMP1-208ENST00000541935 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
EMP1-208ENST00000541935 NACADO15069 1562 aa17.23■□□□□ 0.35
EMP1-208ENST00000541935 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
EMP1-208ENST00000541935 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
EMP1-208ENST00000541935 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
EMP1-208ENST00000541935 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
EMP1-208ENST00000541935 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
EMP1-208ENST00000541935 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
EMP1-208ENST00000541935 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
EMP1-208ENST00000541935 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
EMP1-208ENST00000541935 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
EMP1-208ENST00000541935 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
EMP1-208ENST00000541935 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
EMP1-208ENST00000541935 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
EMP1-208ENST00000541935 UNC13AQ9UPW8 1703 aa16.52■□□□□ 0.24
EMP1-208ENST00000541935 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
EMP1-208ENST00000541935 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
EMP1-208ENST00000541935 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
EMP1-208ENST00000541935 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
EMP1-208ENST00000541935 ZBTB22O15209 634 aa16.39■□□□□ 0.21
EMP1-208ENST00000541935 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
EMP1-208ENST00000541935 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
EMP1-208ENST00000541935 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
EMP1-208ENST00000541935 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
EMP1-208ENST00000541935 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
EMP1-208ENST00000541935 WIZO95785 1651 aa16.17■□□□□ 0.18
EMP1-208ENST00000541935 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
EMP1-208ENST00000541935 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
EMP1-208ENST00000541935 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
EMP1-208ENST00000541935 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
EMP1-208ENST00000541935 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
EMP1-208ENST00000541935 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.14
EMP1-208ENST00000541935 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
EMP1-208ENST00000541935 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
EMP1-208ENST00000541935 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
EMP1-208ENST00000541935 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
EMP1-208ENST00000541935 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
EMP1-208ENST00000541935 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
EMP1-208ENST00000541935 ATXN8OSP0DMR3 200 aa15.82■□□□□ 0.12
EMP1-208ENST00000541935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
EMP1-208ENST00000541935 TRIM41Q8WV44 630 aa15.77■□□□□ 0.12
EMP1-208ENST00000541935 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
EMP1-208ENST00000541935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
EMP1-208ENST00000541935 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
EMP1-208ENST00000541935 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
EMP1-208ENST00000541935 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
EMP1-208ENST00000541935 CFTRP13569 1480 aa15.54■□□□□ 0.08
EMP1-208ENST00000541935 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
EMP1-208ENST00000541935 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
EMP1-208ENST00000541935 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
EMP1-208ENST00000541935 EEA1Q15075 1411 aa15.47■□□□□ 0.07
EMP1-208ENST00000541935 APLP2Q06481 763 aa15.42■□□□□ 0.06
EMP1-208ENST00000541935 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
EMP1-208ENST00000541935 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
EMP1-208ENST00000541935 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
EMP1-208ENST00000541935 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
EMP1-208ENST00000541935 LOC105371045A0A1W2PR82 267 aa15.37■□□□□ 0.05
EMP1-208ENST00000541935 FAM9AQ8IZU1 332 aaPredicted RBP15.37■□□□□ 0.05
EMP1-208ENST00000541935 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
EMP1-208ENST00000541935 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
EMP1-208ENST00000541935 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
EMP1-208ENST00000541935 SOGA1O94964 1423 aa15.3■□□□□ 0.04
EMP1-208ENST00000541935 CUX1P39880 1505 aa15.29■□□□□ 0.04
EMP1-208ENST00000541935 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
EMP1-208ENST00000541935 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
EMP1-208ENST00000541935 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
EMP1-208ENST00000541935 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
EMP1-208ENST00000541935 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
EMP1-208ENST00000541935 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
EMP1-208ENST00000541935 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
EMP1-208ENST00000541935 NESP48681 1621 aa15.17■□□□□ 0.02
EMP1-208ENST00000541935 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
EMP1-208ENST00000541935 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
EMP1-208ENST00000541935 KIF21BO75037 1637 aa15.17■□□□□ 0.02
EMP1-208ENST00000541935 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
EMP1-208ENST00000541935 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
EMP1-208ENST00000541935 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms