RNA–Protein interactions for RNA: ENST00000541254.1

AP002761.2-201, humanhuman

TSL 3 BASIC

Gene AP002761.2, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002761.2-201ENST00000541254 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
AP002761.2-201ENST00000541254 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
AP002761.2-201ENST00000541254 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
AP002761.2-201ENST00000541254 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
AP002761.2-201ENST00000541254 FOXD1Q16676 465 aa23.72■■□□□ 1.39
AP002761.2-201ENST00000541254 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
AP002761.2-201ENST00000541254 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
AP002761.2-201ENST00000541254 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
AP002761.2-201ENST00000541254 ADRA2BP18089 450 aa22.19■■□□□ 1.14
AP002761.2-201ENST00000541254 PIAS4Q8N2W9 510 aaPredicted RBP22.17■■□□□ 1.14
AP002761.2-201ENST00000541254 MSH5O43196 834 aa22.12■■□□□ 1.13
AP002761.2-201ENST00000541254 POTEDQ86YR6 584 aa21.54■■□□□ 1.04
AP002761.2-201ENST00000541254 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
AP002761.2-201ENST00000541254 MAPK8IP2Q13387 824 aaPredicted RBP20.37■□□□□ 0.85
AP002761.2-201ENST00000541254 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
AP002761.2-201ENST00000541254 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
AP002761.2-201ENST00000541254 ABCC9O60706 1549 aa20.12■□□□□ 0.81
AP002761.2-201ENST00000541254 PPP4R3CPQ6ZMV5 832 aa19.92■□□□□ 0.78
AP002761.2-201ENST00000541254 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
AP002761.2-201ENST00000541254 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
AP002761.2-201ENST00000541254 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
AP002761.2-201ENST00000541254 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
AP002761.2-201ENST00000541254 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
AP002761.2-201ENST00000541254 NACADO15069 1562 aa19.36■□□□□ 0.69
AP002761.2-201ENST00000541254 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
AP002761.2-201ENST00000541254 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
AP002761.2-201ENST00000541254 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
AP002761.2-201ENST00000541254 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
AP002761.2-201ENST00000541254 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
AP002761.2-201ENST00000541254 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
AP002761.2-201ENST00000541254 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
AP002761.2-201ENST00000541254 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
AP002761.2-201ENST00000541254 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
AP002761.2-201ENST00000541254 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
AP002761.2-201ENST00000541254 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
AP002761.2-201ENST00000541254 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
AP002761.2-201ENST00000541254 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
AP002761.2-201ENST00000541254 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
AP002761.2-201ENST00000541254 KCNA4P22459 653 aa18.62■□□□□ 0.57
AP002761.2-201ENST00000541254 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
AP002761.2-201ENST00000541254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.55■□□□□ 0.56
AP002761.2-201ENST00000541254 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
AP002761.2-201ENST00000541254 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
AP002761.2-201ENST00000541254 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
AP002761.2-201ENST00000541254 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
AP002761.2-201ENST00000541254 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
AP002761.2-201ENST00000541254 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
AP002761.2-201ENST00000541254 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
AP002761.2-201ENST00000541254 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
AP002761.2-201ENST00000541254 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
AP002761.2-201ENST00000541254 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
AP002761.2-201ENST00000541254 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
AP002761.2-201ENST00000541254 WIZO95785 1651 aa17.93■□□□□ 0.46
AP002761.2-201ENST00000541254 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
AP002761.2-201ENST00000541254 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
AP002761.2-201ENST00000541254 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
AP002761.2-201ENST00000541254 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
AP002761.2-201ENST00000541254 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
AP002761.2-201ENST00000541254 CAPN15O75808 1086 aa17.86■□□□□ 0.45
AP002761.2-201ENST00000541254 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
AP002761.2-201ENST00000541254 DSG3P32926 999 aa17.74■□□□□ 0.43
AP002761.2-201ENST00000541254 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
AP002761.2-201ENST00000541254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
AP002761.2-201ENST00000541254 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
AP002761.2-201ENST00000541254 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
AP002761.2-201ENST00000541254 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
AP002761.2-201ENST00000541254 APLP2Q06481 763 aa17.59■□□□□ 0.41
AP002761.2-201ENST00000541254 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
AP002761.2-201ENST00000541254 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
AP002761.2-201ENST00000541254 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
AP002761.2-201ENST00000541254 NESP48681 1621 aa17.5■□□□□ 0.39
AP002761.2-201ENST00000541254 ABCB7O75027 752 aa17.48■□□□□ 0.39
AP002761.2-201ENST00000541254 CADPSQ9ULU8 1353 aa17.46■□□□□ 0.39
AP002761.2-201ENST00000541254 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
AP002761.2-201ENST00000541254 CFTRP13569 1480 aa17.37■□□□□ 0.37
AP002761.2-201ENST00000541254 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
AP002761.2-201ENST00000541254 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
AP002761.2-201ENST00000541254 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
AP002761.2-201ENST00000541254 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
AP002761.2-201ENST00000541254 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
AP002761.2-201ENST00000541254 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
AP002761.2-201ENST00000541254 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
AP002761.2-201ENST00000541254 ZBTB22O15209 634 aa17.14■□□□□ 0.33
AP002761.2-201ENST00000541254 POLA2Q14181 598 aa17.14■□□□□ 0.33
AP002761.2-201ENST00000541254 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
AP002761.2-201ENST00000541254 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
AP002761.2-201ENST00000541254 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
AP002761.2-201ENST00000541254 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
AP002761.2-201ENST00000541254 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
AP002761.2-201ENST00000541254 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
AP002761.2-201ENST00000541254 TOPBP1Q92547 1522 aa17■□□□□ 0.31
AP002761.2-201ENST00000541254 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
AP002761.2-201ENST00000541254 WDR62O43379 1518 aa16.99■□□□□ 0.31
AP002761.2-201ENST00000541254 CUX1P39880 1505 aa16.99■□□□□ 0.31
AP002761.2-201ENST00000541254 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
AP002761.2-201ENST00000541254 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
AP002761.2-201ENST00000541254 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
AP002761.2-201ENST00000541254 CUX2O14529 1486 aa16.91■□□□□ 0.3
AP002761.2-201ENST00000541254 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
AP002761.2-201ENST00000541254 POTEHQ6S545 545 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms