RNA–Protein interactions for RNA: ENST00000538097.5

NLGN4X-208, Transcript of neuroligin 4 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NLGN4X, Length 3,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN4X-208ENST00000538097 NISCHQ9Y2I1 1504 aa20.4■□□□□ 0.86
NLGN4X-208ENST00000538097 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
NLGN4X-208ENST00000538097 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
NLGN4X-208ENST00000538097 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
NLGN4X-208ENST00000538097 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.31
NLGN4X-208ENST00000538097 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
NLGN4X-208ENST00000538097 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
NLGN4X-208ENST00000538097 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.24
NLGN4X-208ENST00000538097 MYO15BQ96JP2 1530 aa16.56■□□□□ 0.24
NLGN4X-208ENST00000538097 ABCC9O60706 1549 aa16.28■□□□□ 0.2
NLGN4X-208ENST00000538097 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
NLGN4X-208ENST00000538097 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
NLGN4X-208ENST00000538097 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
NLGN4X-208ENST00000538097 HRCP23327 699 aa16.04■□□□□ 0.16
NLGN4X-208ENST00000538097 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
NLGN4X-208ENST00000538097 NACADO15069 1562 aa16.01■□□□□ 0.15
NLGN4X-208ENST00000538097 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
NLGN4X-208ENST00000538097 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
NLGN4X-208ENST00000538097 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
NLGN4X-208ENST00000538097 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
NLGN4X-208ENST00000538097 WIZO95785 1651 aa15.79■□□□□ 0.12
NLGN4X-208ENST00000538097 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
NLGN4X-208ENST00000538097 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
NLGN4X-208ENST00000538097 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
NLGN4X-208ENST00000538097 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
NLGN4X-208ENST00000538097 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
NLGN4X-208ENST00000538097 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
NLGN4X-208ENST00000538097 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
NLGN4X-208ENST00000538097 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
NLGN4X-208ENST00000538097 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
NLGN4X-208ENST00000538097 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
NLGN4X-208ENST00000538097 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
NLGN4X-208ENST00000538097 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
NLGN4X-208ENST00000538097 BICRAQ9NZM4 1560 aa15.38■□□□□ 0.05
NLGN4X-208ENST00000538097 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
NLGN4X-208ENST00000538097 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
NLGN4X-208ENST00000538097 SOGA1O94964 1423 aa15.29■□□□□ 0.04
NLGN4X-208ENST00000538097 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
NLGN4X-208ENST00000538097 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
NLGN4X-208ENST00000538097 CEP162Q5TB80 1403 aa15.19■□□□□ 0.02
NLGN4X-208ENST00000538097 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
NLGN4X-208ENST00000538097 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
NLGN4X-208ENST00000538097 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
NLGN4X-208ENST00000538097 EEA1Q15075 1411 aa15.15■□□□□ 0.02
NLGN4X-208ENST00000538097 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
NLGN4X-208ENST00000538097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
NLGN4X-208ENST00000538097 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
NLGN4X-208ENST00000538097 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
NLGN4X-208ENST00000538097 UBTFP17480 764 aaKnown RBP15.08■□□□□ 0
NLGN4X-208ENST00000538097 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
NLGN4X-208ENST00000538097 GOLGA3Q08378 1498 aa15.07■□□□□ 0
NLGN4X-208ENST00000538097 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
NLGN4X-208ENST00000538097 KIF21BO75037 1637 aa14.98□□□□□ -0.01
NLGN4X-208ENST00000538097 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
NLGN4X-208ENST00000538097 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
NLGN4X-208ENST00000538097 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
NLGN4X-208ENST00000538097 CLIP1P30622 1438 aa14.9□□□□□ -0.02
NLGN4X-208ENST00000538097 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
NLGN4X-208ENST00000538097 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
NLGN4X-208ENST00000538097 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
NLGN4X-208ENST00000538097 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
NLGN4X-208ENST00000538097 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
NLGN4X-208ENST00000538097 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
NLGN4X-208ENST00000538097 CUX1P39880 1505 aa14.78□□□□□ -0.04
NLGN4X-208ENST00000538097 PRXQ9BXM0 1461 aa14.76□□□□□ -0.05
NLGN4X-208ENST00000538097 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
NLGN4X-208ENST00000538097 DIEXFQ68CQ4 756 aaKnown RBP14.74□□□□□ -0.05
NLGN4X-208ENST00000538097 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
NLGN4X-208ENST00000538097 CFTRP13569 1480 aa14.72□□□□□ -0.05
NLGN4X-208ENST00000538097 ARAP1Q96P48 1450 aa14.71□□□□□ -0.05
NLGN4X-208ENST00000538097 APLP2Q06481 763 aa14.69□□□□□ -0.06
NLGN4X-208ENST00000538097 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
NLGN4X-208ENST00000538097 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
NLGN4X-208ENST00000538097 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
NLGN4X-208ENST00000538097 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
NLGN4X-208ENST00000538097 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
NLGN4X-208ENST00000538097 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
NLGN4X-208ENST00000538097 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
NLGN4X-208ENST00000538097 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
NLGN4X-208ENST00000538097 CUX2O14529 1486 aa14.54□□□□□ -0.08
NLGN4X-208ENST00000538097 IGF1RP08069 1367 aa14.54□□□□□ -0.08
NLGN4X-208ENST00000538097 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
NLGN4X-208ENST00000538097 DHX57Q6P158 1386 aaKnown RBP14.51□□□□□ -0.09
NLGN4X-208ENST00000538097 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
NLGN4X-208ENST00000538097 CENPBP07199 599 aaPredicted RBP14.48□□□□□ -0.09
NLGN4X-208ENST00000538097 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
NLGN4X-208ENST00000538097 MIER1Q8N108 512 aa14.46□□□□□ -0.09
NLGN4X-208ENST00000538097 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
NLGN4X-208ENST00000538097 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
NLGN4X-208ENST00000538097 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
NLGN4X-208ENST00000538097 CLSPNQ9HAW4 1339 aa14.42□□□□□ -0.1
NLGN4X-208ENST00000538097 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
NLGN4X-208ENST00000538097 TIAM1Q13009 1591 aa14.39□□□□□ -0.11
NLGN4X-208ENST00000538097 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
NLGN4X-208ENST00000538097 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
NLGN4X-208ENST00000538097 ITGAEP38570 1179 aa14.37□□□□□ -0.11
NLGN4X-208ENST00000538097 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
NLGN4X-208ENST00000538097 NESP48681 1621 aa14.34□□□□□ -0.11
NLGN4X-208ENST00000538097 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
NLGN4X-208ENST00000538097 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms