RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
PDZD3-214ENST00000534790 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
PDZD3-214ENST00000534790 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
PDZD3-214ENST00000534790 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
PDZD3-214ENST00000534790 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
PDZD3-214ENST00000534790 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
PDZD3-214ENST00000534790 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
PDZD3-214ENST00000534790 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
PDZD3-214ENST00000534790 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
PDZD3-214ENST00000534790 ABCC9O60706 1549 aa28.14■■■□□ 2.09
PDZD3-214ENST00000534790 NACADO15069 1562 aa28■■■□□ 2.07
PDZD3-214ENST00000534790 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
PDZD3-214ENST00000534790 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.02
PDZD3-214ENST00000534790 HRCP23327 699 aa27.62■■■□□ 2.01
PDZD3-214ENST00000534790 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
PDZD3-214ENST00000534790 PCGF6Q9BYE7 350 aa27.27■■□□□ 1.96
PDZD3-214ENST00000534790 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
PDZD3-214ENST00000534790 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
PDZD3-214ENST00000534790 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.94
PDZD3-214ENST00000534790 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
PDZD3-214ENST00000534790 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
PDZD3-214ENST00000534790 WIZO95785 1651 aa27.05■■□□□ 1.92
PDZD3-214ENST00000534790 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
PDZD3-214ENST00000534790 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
PDZD3-214ENST00000534790 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
PDZD3-214ENST00000534790 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
PDZD3-214ENST00000534790 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
PDZD3-214ENST00000534790 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
PDZD3-214ENST00000534790 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
PDZD3-214ENST00000534790 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
PDZD3-214ENST00000534790 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
PDZD3-214ENST00000534790 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
PDZD3-214ENST00000534790 FAM9AQ8IZU1 332 aaPredicted RBP26.51■■□□□ 1.83
PDZD3-214ENST00000534790 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
PDZD3-214ENST00000534790 EEA1Q15075 1411 aa26.39■■□□□ 1.81
PDZD3-214ENST00000534790 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
PDZD3-214ENST00000534790 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.78
PDZD3-214ENST00000534790 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
PDZD3-214ENST00000534790 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
PDZD3-214ENST00000534790 TNIKQ9UKE5 1360 aa26.12■■□□□ 1.77
PDZD3-214ENST00000534790 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
PDZD3-214ENST00000534790 SOGA1O94964 1423 aa26.02■■□□□ 1.76
PDZD3-214ENST00000534790 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
PDZD3-214ENST00000534790 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
PDZD3-214ENST00000534790 CSRNP3Q8WYN3 585 aa26.01■■□□□ 1.75
PDZD3-214ENST00000534790 GOLGA3Q08378 1498 aa26■■□□□ 1.75
PDZD3-214ENST00000534790 KIF21BO75037 1637 aa25.94■■□□□ 1.74
PDZD3-214ENST00000534790 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.74
PDZD3-214ENST00000534790 SYNJ1O43426 1573 aa25.89■■□□□ 1.74
PDZD3-214ENST00000534790 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
PDZD3-214ENST00000534790 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
PDZD3-214ENST00000534790 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.72
PDZD3-214ENST00000534790 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
PDZD3-214ENST00000534790 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
PDZD3-214ENST00000534790 UBTFP17480 764 aaKnown RBP25.75■■□□□ 1.71
PDZD3-214ENST00000534790 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
PDZD3-214ENST00000534790 SCAF1Q9H7N4 1312 aaKnown RBP25.71■■□□□ 1.71
PDZD3-214ENST00000534790 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
PDZD3-214ENST00000534790 CLIP1P30622 1438 aa25.58■■□□□ 1.69
PDZD3-214ENST00000534790 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.68
PDZD3-214ENST00000534790 VPS8Q8N3P4 1428 aa25.54■■□□□ 1.68
PDZD3-214ENST00000534790 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
PDZD3-214ENST00000534790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.49■■□□□ 1.67
PDZD3-214ENST00000534790 CFTRP13569 1480 aa25.47■■□□□ 1.67
PDZD3-214ENST00000534790 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
PDZD3-214ENST00000534790 PRXQ9BXM0 1461 aa25.42■■□□□ 1.66
PDZD3-214ENST00000534790 CUX1P39880 1505 aa25.38■■□□□ 1.65
PDZD3-214ENST00000534790 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
PDZD3-214ENST00000534790 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
PDZD3-214ENST00000534790 APLP2Q06481 763 aa25.34■■□□□ 1.65
PDZD3-214ENST00000534790 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
PDZD3-214ENST00000534790 NEUROD1Q13562 356 aa25.24■■□□□ 1.63
PDZD3-214ENST00000534790 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
PDZD3-214ENST00000534790 CENPBP07199 599 aaPredicted RBP25.2■■□□□ 1.62
PDZD3-214ENST00000534790 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
PDZD3-214ENST00000534790 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
PDZD3-214ENST00000534790 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
PDZD3-214ENST00000534790 GTF3C3Q9Y5Q9 886 aa25.07■■□□□ 1.6
PDZD3-214ENST00000534790 CLSPNQ9HAW4 1339 aa25.06■■□□□ 1.6
PDZD3-214ENST00000534790 ZNF316A6NFI3 1004 aaPredicted RBP25.01■■□□□ 1.59
PDZD3-214ENST00000534790 MAP3K1Q13233 1512 aa24.99■■□□□ 1.59
PDZD3-214ENST00000534790 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
PDZD3-214ENST00000534790 CUX2O14529 1486 aa24.98■■□□□ 1.59
PDZD3-214ENST00000534790 RRBP1Q9P2E9 1410 aaKnown RBP24.97■■□□□ 1.59
PDZD3-214ENST00000534790 ARHGAP35Q9NRY4 1499 aa24.97■■□□□ 1.59
PDZD3-214ENST00000534790 IGF1RP08069 1367 aa24.94■■□□□ 1.58
PDZD3-214ENST00000534790 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
PDZD3-214ENST00000534790 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
PDZD3-214ENST00000534790 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
PDZD3-214ENST00000534790 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
PDZD3-214ENST00000534790 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
PDZD3-214ENST00000534790 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
PDZD3-214ENST00000534790 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
PDZD3-214ENST00000534790 FHAD1B1AJZ9 1412 aa24.79■■□□□ 1.56
PDZD3-214ENST00000534790 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
PDZD3-214ENST00000534790 CUL7Q14999 1698 aa24.78■■□□□ 1.56
PDZD3-214ENST00000534790 CCNB3Q8WWL7 1395 aa24.78■■□□□ 1.56
PDZD3-214ENST00000534790 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
PDZD3-214ENST00000534790 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
PDZD3-214ENST00000534790 MYT1Q01538 1121 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms