RNA–Protein interactions for RNA: ENST00000534780.5

PGR-208, Transcript of progesterone receptor, humanhuman

TSL 1 (best)

Gene PGR, Length 2,750 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGR-208ENST00000534780 NISCHQ9Y2I1 1504 aa34.9■■■■□ 3.18
PGR-208ENST00000534780 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
PGR-208ENST00000534780 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
PGR-208ENST00000534780 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
PGR-208ENST00000534780 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
PGR-208ENST00000534780 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
PGR-208ENST00000534780 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
PGR-208ENST00000534780 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
PGR-208ENST00000534780 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.15
PGR-208ENST00000534780 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
PGR-208ENST00000534780 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
PGR-208ENST00000534780 ABCC9O60706 1549 aa27.86■■■□□ 2.05
PGR-208ENST00000534780 PCGF6Q9BYE7 350 aa27.78■■■□□ 2.04
PGR-208ENST00000534780 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.02
PGR-208ENST00000534780 HRCP23327 699 aa27.57■■■□□ 2
PGR-208ENST00000534780 NACADO15069 1562 aa27.52■■■□□ 2
PGR-208ENST00000534780 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
PGR-208ENST00000534780 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
PGR-208ENST00000534780 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
PGR-208ENST00000534780 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
PGR-208ENST00000534780 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
PGR-208ENST00000534780 PPARGC1BQ86YN6 1023 aaKnown RBP27.33■■□□□ 1.97
PGR-208ENST00000534780 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
PGR-208ENST00000534780 WIZO95785 1651 aa27.13■■□□□ 1.93
PGR-208ENST00000534780 PELP1Q8IZL8 1130 aaKnown RBP27.03■■□□□ 1.92
PGR-208ENST00000534780 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
PGR-208ENST00000534780 BAZ1AQ9NRL2 1556 aaPredicted RBP26.77■■□□□ 1.88
PGR-208ENST00000534780 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
PGR-208ENST00000534780 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.87
PGR-208ENST00000534780 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
PGR-208ENST00000534780 ABCC8Q09428 1581 aa26.59■■□□□ 1.85
PGR-208ENST00000534780 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.84
PGR-208ENST00000534780 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
PGR-208ENST00000534780 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
PGR-208ENST00000534780 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
PGR-208ENST00000534780 SMARCA2P51531 1590 aa26.45■■□□□ 1.82
PGR-208ENST00000534780 TTBK1Q5TCY1 1321 aaPredicted RBP26.42■■□□□ 1.82
PGR-208ENST00000534780 SOGA1O94964 1423 aa26.34■■□□□ 1.81
PGR-208ENST00000534780 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
PGR-208ENST00000534780 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
PGR-208ENST00000534780 SCAF1Q9H7N4 1312 aaKnown RBP26.22■■□□□ 1.79
PGR-208ENST00000534780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
PGR-208ENST00000534780 UBTFP17480 764 aaKnown RBP26.12■■□□□ 1.77
PGR-208ENST00000534780 CSRNP3Q8WYN3 585 aa26.1■■□□□ 1.77
PGR-208ENST00000534780 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
PGR-208ENST00000534780 MYT1Q01538 1121 aa26.07■■□□□ 1.76
PGR-208ENST00000534780 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
PGR-208ENST00000534780 CCER1Q8TC90 406 aaPredicted RBP26.01■■□□□ 1.75
PGR-208ENST00000534780 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
PGR-208ENST00000534780 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
PGR-208ENST00000534780 TNIKQ9UKE5 1360 aa25.96■■□□□ 1.75
PGR-208ENST00000534780 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
PGR-208ENST00000534780 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
PGR-208ENST00000534780 RANGAP1P46060 587 aaPredicted RBP25.9■■□□□ 1.74
PGR-208ENST00000534780 EEA1Q15075 1411 aa25.83■■□□□ 1.73
PGR-208ENST00000534780 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
PGR-208ENST00000534780 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
PGR-208ENST00000534780 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.7
PGR-208ENST00000534780 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
PGR-208ENST00000534780 CLIP1P30622 1438 aa25.61■■□□□ 1.69
PGR-208ENST00000534780 KIF21BO75037 1637 aa25.55■■□□□ 1.68
PGR-208ENST00000534780 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
PGR-208ENST00000534780 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
PGR-208ENST00000534780 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
PGR-208ENST00000534780 DIEXFQ68CQ4 756 aaKnown RBP25.44■■□□□ 1.66
PGR-208ENST00000534780 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
PGR-208ENST00000534780 APLP2Q06481 763 aa25.4■■□□□ 1.66
PGR-208ENST00000534780 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
PGR-208ENST00000534780 CUX1P39880 1505 aa25.34■■□□□ 1.65
PGR-208ENST00000534780 NEUROD1Q13562 356 aa25.33■■□□□ 1.64
PGR-208ENST00000534780 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
PGR-208ENST00000534780 GTF3C3Q9Y5Q9 886 aa25.26■■□□□ 1.63
PGR-208ENST00000534780 KANK4Q5T7N3 995 aaPredicted RBP25.25■■□□□ 1.63
PGR-208ENST00000534780 CFTRP13569 1480 aa25.25■■□□□ 1.63
PGR-208ENST00000534780 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
PGR-208ENST00000534780 ZNF316A6NFI3 1004 aaPredicted RBP25.2■■□□□ 1.62
PGR-208ENST00000534780 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
PGR-208ENST00000534780 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
PGR-208ENST00000534780 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
PGR-208ENST00000534780 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
PGR-208ENST00000534780 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
PGR-208ENST00000534780 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
PGR-208ENST00000534780 ITGAEP38570 1179 aa25.03■■□□□ 1.6
PGR-208ENST00000534780 CUX2O14529 1486 aa25.03■■□□□ 1.6
PGR-208ENST00000534780 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
PGR-208ENST00000534780 MIER1Q8N108 512 aa24.99■■□□□ 1.59
PGR-208ENST00000534780 IGF1RP08069 1367 aa24.97■■□□□ 1.59
PGR-208ENST00000534780 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
PGR-208ENST00000534780 CENPBP07199 599 aaPredicted RBP24.93■■□□□ 1.58
PGR-208ENST00000534780 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
PGR-208ENST00000534780 DHX57Q6P158 1386 aaKnown RBP24.9■■□□□ 1.58
PGR-208ENST00000534780 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
PGR-208ENST00000534780 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
PGR-208ENST00000534780 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
PGR-208ENST00000534780 FANCD2Q9BXW9 1451 aa24.8■■□□□ 1.56
PGR-208ENST00000534780 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
PGR-208ENST00000534780 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
PGR-208ENST00000534780 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
PGR-208ENST00000534780 NESP48681 1621 aa24.77■■□□□ 1.56
PGR-208ENST00000534780 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms