RNA–Protein interactions for RNA: ENST00000533783.1

CSRP3-202, Transcript of cysteine and glycine rich protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3-202ENST00000533783 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
CSRP3-202ENST00000533783 CHIC1Q5VXU3 224 aa29.17■■■□□ 2.26
CSRP3-202ENST00000533783 PHF23Q9BUL5 403 aaPredicted RBP25.66■■□□□ 1.7
CSRP3-202ENST00000533783 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
CSRP3-202ENST00000533783 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
CSRP3-202ENST00000533783 FOXD1Q16676 465 aa23.76■■□□□ 1.39
CSRP3-202ENST00000533783 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
CSRP3-202ENST00000533783 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
CSRP3-202ENST00000533783 ADRA2BP18089 450 aa22.67■■□□□ 1.22
CSRP3-202ENST00000533783 PIAS4Q8N2W9 510 aaPredicted RBP22.34■■□□□ 1.17
CSRP3-202ENST00000533783 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
CSRP3-202ENST00000533783 MSH5O43196 834 aa21.96■■□□□ 1.11
CSRP3-202ENST00000533783 ABCC9O60706 1549 aa21.22■□□□□ 0.99
CSRP3-202ENST00000533783 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
CSRP3-202ENST00000533783 PPP4R3CPQ6ZMV5 832 aa20.75■□□□□ 0.91
CSRP3-202ENST00000533783 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
CSRP3-202ENST00000533783 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
CSRP3-202ENST00000533783 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
CSRP3-202ENST00000533783 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.89
CSRP3-202ENST00000533783 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
CSRP3-202ENST00000533783 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
CSRP3-202ENST00000533783 NACADO15069 1562 aa20.61■□□□□ 0.89
CSRP3-202ENST00000533783 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
CSRP3-202ENST00000533783 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
CSRP3-202ENST00000533783 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
CSRP3-202ENST00000533783 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
CSRP3-202ENST00000533783 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
CSRP3-202ENST00000533783 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
CSRP3-202ENST00000533783 KCNA4P22459 653 aa20.03■□□□□ 0.8
CSRP3-202ENST00000533783 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
CSRP3-202ENST00000533783 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
CSRP3-202ENST00000533783 RNF216Q9NWF9 866 aaPredicted RBP19.87■□□□□ 0.77
CSRP3-202ENST00000533783 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
CSRP3-202ENST00000533783 NPM3O75607 178 aaKnown RBP19.86■□□□□ 0.77
CSRP3-202ENST00000533783 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
CSRP3-202ENST00000533783 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
CSRP3-202ENST00000533783 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
CSRP3-202ENST00000533783 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
CSRP3-202ENST00000533783 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
CSRP3-202ENST00000533783 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
CSRP3-202ENST00000533783 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
CSRP3-202ENST00000533783 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
CSRP3-202ENST00000533783 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
CSRP3-202ENST00000533783 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
CSRP3-202ENST00000533783 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.65
CSRP3-202ENST00000533783 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
CSRP3-202ENST00000533783 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
CSRP3-202ENST00000533783 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
CSRP3-202ENST00000533783 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.63
CSRP3-202ENST00000533783 WIZO95785 1651 aa18.98■□□□□ 0.63
CSRP3-202ENST00000533783 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
CSRP3-202ENST00000533783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.62
CSRP3-202ENST00000533783 BAZ1BQ9UIG0 1483 aaKnown RBP18.91■□□□□ 0.62
CSRP3-202ENST00000533783 RNF39Q9H2S5 420 aa18.83■□□□□ 0.6
CSRP3-202ENST00000533783 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
CSRP3-202ENST00000533783 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
CSRP3-202ENST00000533783 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
CSRP3-202ENST00000533783 U3KPZ7 1027 aaPredicted RBP18.61■□□□□ 0.57
CSRP3-202ENST00000533783 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
CSRP3-202ENST00000533783 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
CSRP3-202ENST00000533783 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
CSRP3-202ENST00000533783 CACNB1Q02641 598 aaPredicted RBP18.49■□□□□ 0.55
CSRP3-202ENST00000533783 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
CSRP3-202ENST00000533783 NESP48681 1621 aa18.46■□□□□ 0.55
CSRP3-202ENST00000533783 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
CSRP3-202ENST00000533783 CFTRP13569 1480 aa18.46■□□□□ 0.55
CSRP3-202ENST00000533783 ZBTB22O15209 634 aa18.44■□□□□ 0.54
CSRP3-202ENST00000533783 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.53
CSRP3-202ENST00000533783 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.52
CSRP3-202ENST00000533783 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
CSRP3-202ENST00000533783 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
CSRP3-202ENST00000533783 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
CSRP3-202ENST00000533783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
CSRP3-202ENST00000533783 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
CSRP3-202ENST00000533783 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
CSRP3-202ENST00000533783 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
CSRP3-202ENST00000533783 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
CSRP3-202ENST00000533783 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
CSRP3-202ENST00000533783 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
CSRP3-202ENST00000533783 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
CSRP3-202ENST00000533783 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
CSRP3-202ENST00000533783 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
CSRP3-202ENST00000533783 APLP2Q06481 763 aa18.1■□□□□ 0.49
CSRP3-202ENST00000533783 CAPN15O75808 1086 aa18.07■□□□□ 0.48
CSRP3-202ENST00000533783 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
CSRP3-202ENST00000533783 WDR62O43379 1518 aa18.05■□□□□ 0.48
CSRP3-202ENST00000533783 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
CSRP3-202ENST00000533783 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
CSRP3-202ENST00000533783 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
CSRP3-202ENST00000533783 CUX2O14529 1486 aa17.99■□□□□ 0.47
CSRP3-202ENST00000533783 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
CSRP3-202ENST00000533783 CUX1P39880 1505 aa17.98■□□□□ 0.47
CSRP3-202ENST00000533783 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
CSRP3-202ENST00000533783 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
CSRP3-202ENST00000533783 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
CSRP3-202ENST00000533783 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
CSRP3-202ENST00000533783 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
CSRP3-202ENST00000533783 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
CSRP3-202ENST00000533783 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
CSRP3-202ENST00000533783 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms