RNA–Protein interactions for RNA: ENST00000532841.5

LINC01559-204, Transcript of long intergenic non-protein coding RNA 1559, humanhuman

TSL 1 (best)

Gene LINC01559, Length 1,003 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559-204ENST00000532841 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
LINC01559-204ENST00000532841 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
LINC01559-204ENST00000532841 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
LINC01559-204ENST00000532841 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
LINC01559-204ENST00000532841 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
LINC01559-204ENST00000532841 FOXD1Q16676 465 aa23.6■■□□□ 1.37
LINC01559-204ENST00000532841 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
LINC01559-204ENST00000532841 ABCC9O60706 1549 aa22.8■■□□□ 1.24
LINC01559-204ENST00000532841 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
LINC01559-204ENST00000532841 MSH5O43196 834 aa22.13■■□□□ 1.13
LINC01559-204ENST00000532841 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
LINC01559-204ENST00000532841 PIAS4Q8N2W9 510 aaPredicted RBP22.06■■□□□ 1.12
LINC01559-204ENST00000532841 ADRA2BP18089 450 aa21.99■■□□□ 1.11
LINC01559-204ENST00000532841 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
LINC01559-204ENST00000532841 NACADO15069 1562 aa21.66■■□□□ 1.06
LINC01559-204ENST00000532841 POTEDQ86YR6 584 aa21.55■■□□□ 1.04
LINC01559-204ENST00000532841 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
LINC01559-204ENST00000532841 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
LINC01559-204ENST00000532841 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
LINC01559-204ENST00000532841 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
LINC01559-204ENST00000532841 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
LINC01559-204ENST00000532841 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
LINC01559-204ENST00000532841 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
LINC01559-204ENST00000532841 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
LINC01559-204ENST00000532841 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
LINC01559-204ENST00000532841 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
LINC01559-204ENST00000532841 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
LINC01559-204ENST00000532841 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
LINC01559-204ENST00000532841 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
LINC01559-204ENST00000532841 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
LINC01559-204ENST00000532841 MAPK8IP2Q13387 824 aaPredicted RBP20.21■□□□□ 0.83
LINC01559-204ENST00000532841 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
LINC01559-204ENST00000532841 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
LINC01559-204ENST00000532841 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
LINC01559-204ENST00000532841 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
LINC01559-204ENST00000532841 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
LINC01559-204ENST00000532841 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
LINC01559-204ENST00000532841 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
LINC01559-204ENST00000532841 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
LINC01559-204ENST00000532841 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
LINC01559-204ENST00000532841 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
LINC01559-204ENST00000532841 CUX2O14529 1486 aa19.71■□□□□ 0.75
LINC01559-204ENST00000532841 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
LINC01559-204ENST00000532841 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
LINC01559-204ENST00000532841 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
LINC01559-204ENST00000532841 NESP48681 1621 aa19.61■□□□□ 0.73
LINC01559-204ENST00000532841 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
LINC01559-204ENST00000532841 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
LINC01559-204ENST00000532841 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
LINC01559-204ENST00000532841 CNKSR2Q8WXI2 1034 aa19.4■□□□□ 0.7
LINC01559-204ENST00000532841 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
LINC01559-204ENST00000532841 WIZO95785 1651 aa19.38■□□□□ 0.69
LINC01559-204ENST00000532841 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
LINC01559-204ENST00000532841 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
LINC01559-204ENST00000532841 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
LINC01559-204ENST00000532841 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
LINC01559-204ENST00000532841 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
LINC01559-204ENST00000532841 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
LINC01559-204ENST00000532841 CFTRP13569 1480 aa19.2■□□□□ 0.66
LINC01559-204ENST00000532841 WDR62O43379 1518 aa19.18■□□□□ 0.66
LINC01559-204ENST00000532841 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
LINC01559-204ENST00000532841 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
LINC01559-204ENST00000532841 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
LINC01559-204ENST00000532841 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
LINC01559-204ENST00000532841 CCDC88BA6NC98 1476 aa18.99■□□□□ 0.63
LINC01559-204ENST00000532841 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
LINC01559-204ENST00000532841 URB2Q14146 1524 aaKnown RBP18.98■□□□□ 0.63
LINC01559-204ENST00000532841 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
LINC01559-204ENST00000532841 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
LINC01559-204ENST00000532841 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
LINC01559-204ENST00000532841 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
LINC01559-204ENST00000532841 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
LINC01559-204ENST00000532841 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
LINC01559-204ENST00000532841 ZNF608Q9ULD9 1512 aaPredicted RBP18.73■□□□□ 0.59
LINC01559-204ENST00000532841 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
LINC01559-204ENST00000532841 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
LINC01559-204ENST00000532841 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
LINC01559-204ENST00000532841 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
LINC01559-204ENST00000532841 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
LINC01559-204ENST00000532841 POLA1P09884 1462 aaPredicted RBP18.59■□□□□ 0.57
LINC01559-204ENST00000532841 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
LINC01559-204ENST00000532841 EIF4G3O43432 1585 aaKnown RBP18.57■□□□□ 0.56
LINC01559-204ENST00000532841 SOGA1O94964 1423 aa18.54■□□□□ 0.56
LINC01559-204ENST00000532841 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
LINC01559-204ENST00000532841 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
LINC01559-204ENST00000532841 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
LINC01559-204ENST00000532841 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
LINC01559-204ENST00000532841 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
LINC01559-204ENST00000532841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.55
LINC01559-204ENST00000532841 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
LINC01559-204ENST00000532841 CUX1P39880 1505 aa18.46■□□□□ 0.55
LINC01559-204ENST00000532841 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
LINC01559-204ENST00000532841 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
LINC01559-204ENST00000532841 CHD1O14646 1710 aa18.4■□□□□ 0.54
LINC01559-204ENST00000532841 FBLN2P98095 1184 aa18.4■□□□□ 0.54
LINC01559-204ENST00000532841 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
LINC01559-204ENST00000532841 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
LINC01559-204ENST00000532841 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
LINC01559-204ENST00000532841 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
LINC01559-204ENST00000532841 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms