RNA–Protein interactions for RNA: ENST00000531487.1

FDXACB1-203, Transcript of ferredoxin-fold anticodon binding domain containing 1, humanhuman

TSL 1 (best)

Gene FDXACB1, Length 2,206 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDXACB1-203ENST00000531487 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
FDXACB1-203ENST00000531487 CCDC180Q9P1Z9 1646 aa26.69■■□□□ 1.86
FDXACB1-203ENST00000531487 HRCP23327 699 aa25.92■■□□□ 1.74
FDXACB1-203ENST00000531487 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
FDXACB1-203ENST00000531487 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
FDXACB1-203ENST00000531487 PELP1Q8IZL8 1130 aaKnown RBP25.46■■□□□ 1.67
FDXACB1-203ENST00000531487 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
FDXACB1-203ENST00000531487 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
FDXACB1-203ENST00000531487 ABCC9O60706 1549 aa25.32■■□□□ 1.64
FDXACB1-203ENST00000531487 PCGF6Q9BYE7 350 aa25.2■■□□□ 1.62
FDXACB1-203ENST00000531487 PPARGC1BQ86YN6 1023 aaKnown RBP25.15■■□□□ 1.62
FDXACB1-203ENST00000531487 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
FDXACB1-203ENST00000531487 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
FDXACB1-203ENST00000531487 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
FDXACB1-203ENST00000531487 NACADO15069 1562 aa24.8■■□□□ 1.56
FDXACB1-203ENST00000531487 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
FDXACB1-203ENST00000531487 MYT1Q01538 1121 aa24.61■■□□□ 1.53
FDXACB1-203ENST00000531487 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
FDXACB1-203ENST00000531487 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
FDXACB1-203ENST00000531487 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
FDXACB1-203ENST00000531487 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
FDXACB1-203ENST00000531487 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
FDXACB1-203ENST00000531487 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
FDXACB1-203ENST00000531487 CECR2Q9BXF3 1484 aa24.05■■□□□ 1.44
FDXACB1-203ENST00000531487 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
FDXACB1-203ENST00000531487 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
FDXACB1-203ENST00000531487 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
FDXACB1-203ENST00000531487 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
FDXACB1-203ENST00000531487 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.42
FDXACB1-203ENST00000531487 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
FDXACB1-203ENST00000531487 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
FDXACB1-203ENST00000531487 WIZO95785 1651 aa23.74■■□□□ 1.39
FDXACB1-203ENST00000531487 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
FDXACB1-203ENST00000531487 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
FDXACB1-203ENST00000531487 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
FDXACB1-203ENST00000531487 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
FDXACB1-203ENST00000531487 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
FDXACB1-203ENST00000531487 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
FDXACB1-203ENST00000531487 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
FDXACB1-203ENST00000531487 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
FDXACB1-203ENST00000531487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
FDXACB1-203ENST00000531487 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
FDXACB1-203ENST00000531487 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
FDXACB1-203ENST00000531487 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
FDXACB1-203ENST00000531487 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.31
FDXACB1-203ENST00000531487 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
FDXACB1-203ENST00000531487 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.29
FDXACB1-203ENST00000531487 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
FDXACB1-203ENST00000531487 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
FDXACB1-203ENST00000531487 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
FDXACB1-203ENST00000531487 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
FDXACB1-203ENST00000531487 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
FDXACB1-203ENST00000531487 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
FDXACB1-203ENST00000531487 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
FDXACB1-203ENST00000531487 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
FDXACB1-203ENST00000531487 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
FDXACB1-203ENST00000531487 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
FDXACB1-203ENST00000531487 MIER1Q8N108 512 aa22.77■■□□□ 1.24
FDXACB1-203ENST00000531487 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
FDXACB1-203ENST00000531487 ANP32EQ9BTT0 268 aa22.7■■□□□ 1.23
FDXACB1-203ENST00000531487 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
FDXACB1-203ENST00000531487 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
FDXACB1-203ENST00000531487 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
FDXACB1-203ENST00000531487 CFTRP13569 1480 aa22.5■■□□□ 1.19
FDXACB1-203ENST00000531487 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
FDXACB1-203ENST00000531487 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
FDXACB1-203ENST00000531487 SOGA1O94964 1423 aa22.43■■□□□ 1.18
FDXACB1-203ENST00000531487 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
FDXACB1-203ENST00000531487 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
FDXACB1-203ENST00000531487 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
FDXACB1-203ENST00000531487 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
FDXACB1-203ENST00000531487 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
FDXACB1-203ENST00000531487 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
FDXACB1-203ENST00000531487 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
FDXACB1-203ENST00000531487 CUX1P39880 1505 aa22.31■■□□□ 1.16
FDXACB1-203ENST00000531487 NESP48681 1621 aa22.31■■□□□ 1.16
FDXACB1-203ENST00000531487 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
FDXACB1-203ENST00000531487 EEA1Q15075 1411 aa22.19■■□□□ 1.14
FDXACB1-203ENST00000531487 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
FDXACB1-203ENST00000531487 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
FDXACB1-203ENST00000531487 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
FDXACB1-203ENST00000531487 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
FDXACB1-203ENST00000531487 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
FDXACB1-203ENST00000531487 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
FDXACB1-203ENST00000531487 KIF21BO75037 1637 aa21.98■■□□□ 1.11
FDXACB1-203ENST00000531487 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
FDXACB1-203ENST00000531487 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
FDXACB1-203ENST00000531487 RBM19Q9Y4C8 960 aaKnown RBP21.96■■□□□ 1.11
FDXACB1-203ENST00000531487 BCANQ96GW7 911 aa21.96■■□□□ 1.11
FDXACB1-203ENST00000531487 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
FDXACB1-203ENST00000531487 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
FDXACB1-203ENST00000531487 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
FDXACB1-203ENST00000531487 APLP2Q06481 763 aa21.93■■□□□ 1.1
FDXACB1-203ENST00000531487 FKBP8Q14318 412 aa21.93■■□□□ 1.1
FDXACB1-203ENST00000531487 DHX57Q6P158 1386 aaKnown RBP21.91■■□□□ 1.1
FDXACB1-203ENST00000531487 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
FDXACB1-203ENST00000531487 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
FDXACB1-203ENST00000531487 KIF27Q86VH2 1401 aa21.89■■□□□ 1.1
FDXACB1-203ENST00000531487 NEFLP07196 543 aa21.89■■□□□ 1.09
FDXACB1-203ENST00000531487 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms