RNA–Protein interactions for RNA: ENST00000530642.1

FOXRED1-210, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 3,045 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-210ENST00000530642 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
FOXRED1-210ENST00000530642 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
FOXRED1-210ENST00000530642 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
FOXRED1-210ENST00000530642 SLC24A1O60721 1099 aa15.78■□□□□ 0.12
FOXRED1-210ENST00000530642 CCDC180Q9P1Z9 1646 aa15.77■□□□□ 0.11
FOXRED1-210ENST00000530642 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
FOXRED1-210ENST00000530642 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
FOXRED1-210ENST00000530642 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
FOXRED1-210ENST00000530642 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
FOXRED1-210ENST00000530642 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
FOXRED1-210ENST00000530642 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
FOXRED1-210ENST00000530642 DCAF1Q9Y4B6 1507 aa15.05■□□□□ 0
FOXRED1-210ENST00000530642 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
FOXRED1-210ENST00000530642 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
FOXRED1-210ENST00000530642 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
FOXRED1-210ENST00000530642 ABCC9O60706 1549 aa14.78□□□□□ -0.04
FOXRED1-210ENST00000530642 NACADO15069 1562 aa14.65□□□□□ -0.06
FOXRED1-210ENST00000530642 KCNA4P22459 653 aa14.65□□□□□ -0.06
FOXRED1-210ENST00000530642 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
FOXRED1-210ENST00000530642 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
FOXRED1-210ENST00000530642 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
FOXRED1-210ENST00000530642 RB1CC1Q8TDY2 1594 aa14.48□□□□□ -0.09
FOXRED1-210ENST00000530642 HRCP23327 699 aa14.36□□□□□ -0.11
FOXRED1-210ENST00000530642 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
FOXRED1-210ENST00000530642 UNC13AQ9UPW8 1703 aa14.22□□□□□ -0.13
FOXRED1-210ENST00000530642 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
FOXRED1-210ENST00000530642 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
FOXRED1-210ENST00000530642 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
FOXRED1-210ENST00000530642 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
FOXRED1-210ENST00000530642 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
FOXRED1-210ENST00000530642 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
FOXRED1-210ENST00000530642 MYT1Q01538 1121 aa14.08□□□□□ -0.16
FOXRED1-210ENST00000530642 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
FOXRED1-210ENST00000530642 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
FOXRED1-210ENST00000530642 WIZO95785 1651 aa13.99□□□□□ -0.17
FOXRED1-210ENST00000530642 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
FOXRED1-210ENST00000530642 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
FOXRED1-210ENST00000530642 ADRA2BP18089 450 aa13.98□□□□□ -0.17
FOXRED1-210ENST00000530642 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
FOXRED1-210ENST00000530642 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
FOXRED1-210ENST00000530642 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
FOXRED1-210ENST00000530642 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
FOXRED1-210ENST00000530642 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
FOXRED1-210ENST00000530642 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
FOXRED1-210ENST00000530642 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
FOXRED1-210ENST00000530642 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
FOXRED1-210ENST00000530642 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
FOXRED1-210ENST00000530642 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
FOXRED1-210ENST00000530642 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
FOXRED1-210ENST00000530642 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
FOXRED1-210ENST00000530642 ZBTB22O15209 634 aa13.68□□□□□ -0.22
FOXRED1-210ENST00000530642 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
FOXRED1-210ENST00000530642 BAZ1BQ9UIG0 1483 aaKnown RBP13.62□□□□□ -0.23
FOXRED1-210ENST00000530642 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
FOXRED1-210ENST00000530642 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
FOXRED1-210ENST00000530642 HMGXB3Q12766 1538 aa13.52□□□□□ -0.24
FOXRED1-210ENST00000530642 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
FOXRED1-210ENST00000530642 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
FOXRED1-210ENST00000530642 TTBK1Q5TCY1 1321 aaPredicted RBP13.4□□□□□ -0.26
FOXRED1-210ENST00000530642 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
FOXRED1-210ENST00000530642 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
FOXRED1-210ENST00000530642 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
FOXRED1-210ENST00000530642 CC2D2AQ9P2K1 1620 aa13.37□□□□□ -0.27
FOXRED1-210ENST00000530642 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
FOXRED1-210ENST00000530642 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
FOXRED1-210ENST00000530642 APLP2Q06481 763 aa13.32□□□□□ -0.28
FOXRED1-210ENST00000530642 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
FOXRED1-210ENST00000530642 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
FOXRED1-210ENST00000530642 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
FOXRED1-210ENST00000530642 CFTRP13569 1480 aa13.3□□□□□ -0.28
FOXRED1-210ENST00000530642 SOGA1O94964 1423 aa13.29□□□□□ -0.28
FOXRED1-210ENST00000530642 ERICH6Q7L0X2 663 aa13.28□□□□□ -0.28
FOXRED1-210ENST00000530642 PPP6R1Q9UPN7 881 aa13.28□□□□□ -0.28
FOXRED1-210ENST00000530642 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
FOXRED1-210ENST00000530642 EEA1Q15075 1411 aa13.27□□□□□ -0.28
FOXRED1-210ENST00000530642 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
FOXRED1-210ENST00000530642 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
FOXRED1-210ENST00000530642 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
FOXRED1-210ENST00000530642 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.29
FOXRED1-210ENST00000530642 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
FOXRED1-210ENST00000530642 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
FOXRED1-210ENST00000530642 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
FOXRED1-210ENST00000530642 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
FOXRED1-210ENST00000530642 CUX1P39880 1505 aa13.17□□□□□ -0.3
FOXRED1-210ENST00000530642 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
FOXRED1-210ENST00000530642 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
FOXRED1-210ENST00000530642 BCANQ96GW7 911 aa13.14□□□□□ -0.31
FOXRED1-210ENST00000530642 CENPBP07199 599 aaPredicted RBP13.13□□□□□ -0.31
FOXRED1-210ENST00000530642 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
FOXRED1-210ENST00000530642 ARXQ96QS3 562 aa13.11□□□□□ -0.31
FOXRED1-210ENST00000530642 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
FOXRED1-210ENST00000530642 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
FOXRED1-210ENST00000530642 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
FOXRED1-210ENST00000530642 KIF21BO75037 1637 aa13.09□□□□□ -0.31
FOXRED1-210ENST00000530642 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
FOXRED1-210ENST00000530642 FKBP8Q14318 412 aa13.07□□□□□ -0.32
FOXRED1-210ENST00000530642 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
FOXRED1-210ENST00000530642 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
FOXRED1-210ENST00000530642 NESP48681 1621 aa13.05□□□□□ -0.32
FOXRED1-210ENST00000530642 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms