RNA–Protein interactions for RNA: ENST00000530298.5

NTRK1-207, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 2

Gene NTRK1, Length 3,052 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-207ENST00000530298 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
NTRK1-207ENST00000530298 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
NTRK1-207ENST00000530298 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
NTRK1-207ENST00000530298 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
NTRK1-207ENST00000530298 ZCCHC6Q5VYS8 1495 aaKnown RBP24.84■■□□□ 1.57
NTRK1-207ENST00000530298 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.48
NTRK1-207ENST00000530298 ABCC9O60706 1549 aa24.15■■□□□ 1.46
NTRK1-207ENST00000530298 HRCP23327 699 aa24.13■■□□□ 1.45
NTRK1-207ENST00000530298 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
NTRK1-207ENST00000530298 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
NTRK1-207ENST00000530298 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
NTRK1-207ENST00000530298 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
NTRK1-207ENST00000530298 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
NTRK1-207ENST00000530298 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
NTRK1-207ENST00000530298 NACADO15069 1562 aa23.54■■□□□ 1.36
NTRK1-207ENST00000530298 MYT1Q01538 1121 aa23.36■■□□□ 1.33
NTRK1-207ENST00000530298 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
NTRK1-207ENST00000530298 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
NTRK1-207ENST00000530298 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
NTRK1-207ENST00000530298 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
NTRK1-207ENST00000530298 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
NTRK1-207ENST00000530298 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
NTRK1-207ENST00000530298 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
NTRK1-207ENST00000530298 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
NTRK1-207ENST00000530298 WIZO95785 1651 aa22.81■■□□□ 1.24
NTRK1-207ENST00000530298 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
NTRK1-207ENST00000530298 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
NTRK1-207ENST00000530298 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
NTRK1-207ENST00000530298 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
NTRK1-207ENST00000530298 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
NTRK1-207ENST00000530298 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
NTRK1-207ENST00000530298 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
NTRK1-207ENST00000530298 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
NTRK1-207ENST00000530298 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
NTRK1-207ENST00000530298 ACIN1Q9UKV3 1341 aaKnown RBP22.4■■□□□ 1.18
NTRK1-207ENST00000530298 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.18
NTRK1-207ENST00000530298 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
NTRK1-207ENST00000530298 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
NTRK1-207ENST00000530298 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
NTRK1-207ENST00000530298 GTF3C3Q9Y5Q9 886 aa22.26■■□□□ 1.15
NTRK1-207ENST00000530298 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
NTRK1-207ENST00000530298 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
NTRK1-207ENST00000530298 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.14
NTRK1-207ENST00000530298 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
NTRK1-207ENST00000530298 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
NTRK1-207ENST00000530298 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
NTRK1-207ENST00000530298 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
NTRK1-207ENST00000530298 SOGA1O94964 1423 aa21.87■■□□□ 1.09
NTRK1-207ENST00000530298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
NTRK1-207ENST00000530298 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
NTRK1-207ENST00000530298 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
NTRK1-207ENST00000530298 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
NTRK1-207ENST00000530298 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
NTRK1-207ENST00000530298 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
NTRK1-207ENST00000530298 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
NTRK1-207ENST00000530298 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
NTRK1-207ENST00000530298 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
NTRK1-207ENST00000530298 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
NTRK1-207ENST00000530298 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
NTRK1-207ENST00000530298 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
NTRK1-207ENST00000530298 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
NTRK1-207ENST00000530298 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
NTRK1-207ENST00000530298 EEA1Q15075 1411 aa21.52■■□□□ 1.04
NTRK1-207ENST00000530298 CFTRP13569 1480 aa21.5■■□□□ 1.03
NTRK1-207ENST00000530298 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
NTRK1-207ENST00000530298 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
NTRK1-207ENST00000530298 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
NTRK1-207ENST00000530298 TNIKQ9UKE5 1360 aa21.43■■□□□ 1.02
NTRK1-207ENST00000530298 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
NTRK1-207ENST00000530298 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
NTRK1-207ENST00000530298 GOLGA3Q08378 1498 aa21.42■■□□□ 1.02
NTRK1-207ENST00000530298 CUX1P39880 1505 aa21.41■■□□□ 1.02
NTRK1-207ENST00000530298 ZNF316A6NFI3 1004 aaPredicted RBP21.39■■□□□ 1.01
NTRK1-207ENST00000530298 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
NTRK1-207ENST00000530298 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
NTRK1-207ENST00000530298 NESP48681 1621 aa21.32■■□□□ 1
NTRK1-207ENST00000530298 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
NTRK1-207ENST00000530298 MIER1Q8N108 512 aa21.29■■□□□ 1
NTRK1-207ENST00000530298 PRKCSHP14314 528 aaPredicted RBP21.24■□□□□ 0.99
NTRK1-207ENST00000530298 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
NTRK1-207ENST00000530298 KIF21BO75037 1637 aa21.22■□□□□ 0.99
NTRK1-207ENST00000530298 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
NTRK1-207ENST00000530298 CLIP1P30622 1438 aa21.22■□□□□ 0.99
NTRK1-207ENST00000530298 CUX2O14529 1486 aa21.18■□□□□ 0.98
NTRK1-207ENST00000530298 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
NTRK1-207ENST00000530298 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
NTRK1-207ENST00000530298 PRXQ9BXM0 1461 aa21.11■□□□□ 0.97
NTRK1-207ENST00000530298 TSHZ2Q9NRE2 1034 aa21.09■□□□□ 0.97
NTRK1-207ENST00000530298 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
NTRK1-207ENST00000530298 APLP2Q06481 763 aa21.06■□□□□ 0.96
NTRK1-207ENST00000530298 IGF1RP08069 1367 aa21.05■□□□□ 0.96
NTRK1-207ENST00000530298 SUPT16HQ9Y5B9 1047 aaKnown RBP21.04■□□□□ 0.96
NTRK1-207ENST00000530298 TOPBP1Q92547 1522 aa21■□□□□ 0.95
NTRK1-207ENST00000530298 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
NTRK1-207ENST00000530298 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
NTRK1-207ENST00000530298 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
NTRK1-207ENST00000530298 CARMIL1Q5VZK9 1371 aa20.98■□□□□ 0.95
NTRK1-207ENST00000530298 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
NTRK1-207ENST00000530298 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
NTRK1-207ENST00000530298 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms