RNA–Protein interactions for RNA: ENST00000530095.1

THUMPD2-207, Transcript of THUMP domain containing 2, humanhuman

TSL 3

Gene THUMPD2, Length 662 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-207ENST00000530095 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
THUMPD2-207ENST00000530095 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
THUMPD2-207ENST00000530095 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
THUMPD2-207ENST00000530095 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
THUMPD2-207ENST00000530095 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
THUMPD2-207ENST00000530095 FOXD1Q16676 465 aa20.02■□□□□ 0.8
THUMPD2-207ENST00000530095 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
THUMPD2-207ENST00000530095 ABCC9O60706 1549 aa19.21■□□□□ 0.67
THUMPD2-207ENST00000530095 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
THUMPD2-207ENST00000530095 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
THUMPD2-207ENST00000530095 ADRA2BP18089 450 aa19.01■□□□□ 0.63
THUMPD2-207ENST00000530095 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
THUMPD2-207ENST00000530095 MSH5O43196 834 aa18.59■□□□□ 0.57
THUMPD2-207ENST00000530095 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
THUMPD2-207ENST00000530095 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
THUMPD2-207ENST00000530095 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
THUMPD2-207ENST00000530095 NACADO15069 1562 aa17.96■□□□□ 0.46
THUMPD2-207ENST00000530095 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
THUMPD2-207ENST00000530095 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
THUMPD2-207ENST00000530095 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
THUMPD2-207ENST00000530095 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
THUMPD2-207ENST00000530095 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
THUMPD2-207ENST00000530095 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
THUMPD2-207ENST00000530095 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
THUMPD2-207ENST00000530095 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
THUMPD2-207ENST00000530095 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
THUMPD2-207ENST00000530095 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
THUMPD2-207ENST00000530095 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
THUMPD2-207ENST00000530095 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
THUMPD2-207ENST00000530095 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
THUMPD2-207ENST00000530095 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
THUMPD2-207ENST00000530095 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
THUMPD2-207ENST00000530095 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
THUMPD2-207ENST00000530095 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
THUMPD2-207ENST00000530095 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
THUMPD2-207ENST00000530095 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
THUMPD2-207ENST00000530095 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
THUMPD2-207ENST00000530095 KCNA4P22459 653 aa16.67■□□□□ 0.26
THUMPD2-207ENST00000530095 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
THUMPD2-207ENST00000530095 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
THUMPD2-207ENST00000530095 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
THUMPD2-207ENST00000530095 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
THUMPD2-207ENST00000530095 CUX2O14529 1486 aa16.54■□□□□ 0.24
THUMPD2-207ENST00000530095 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
THUMPD2-207ENST00000530095 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
THUMPD2-207ENST00000530095 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
THUMPD2-207ENST00000530095 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
THUMPD2-207ENST00000530095 NESP48681 1621 aa16.45■□□□□ 0.22
THUMPD2-207ENST00000530095 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
THUMPD2-207ENST00000530095 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
THUMPD2-207ENST00000530095 BAZ1BQ9UIG0 1483 aaKnown RBP16.38■□□□□ 0.21
THUMPD2-207ENST00000530095 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
THUMPD2-207ENST00000530095 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
THUMPD2-207ENST00000530095 LAMC3Q9Y6N6 1575 aa16.28■□□□□ 0.2
THUMPD2-207ENST00000530095 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
THUMPD2-207ENST00000530095 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
THUMPD2-207ENST00000530095 WIZO95785 1651 aa16.17■□□□□ 0.18
THUMPD2-207ENST00000530095 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
THUMPD2-207ENST00000530095 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
THUMPD2-207ENST00000530095 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
THUMPD2-207ENST00000530095 WDR62O43379 1518 aa16.02■□□□□ 0.15
THUMPD2-207ENST00000530095 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
THUMPD2-207ENST00000530095 CADPSQ9ULU8 1353 aa15.98■□□□□ 0.15
THUMPD2-207ENST00000530095 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
THUMPD2-207ENST00000530095 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
THUMPD2-207ENST00000530095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
THUMPD2-207ENST00000530095 RNF39Q9H2S5 420 aa15.89■□□□□ 0.13
THUMPD2-207ENST00000530095 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
THUMPD2-207ENST00000530095 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
THUMPD2-207ENST00000530095 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
THUMPD2-207ENST00000530095 CFTRP13569 1480 aa15.78■□□□□ 0.12
THUMPD2-207ENST00000530095 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
THUMPD2-207ENST00000530095 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
THUMPD2-207ENST00000530095 RIMBP3CA6NJZ7 1639 aa15.73■□□□□ 0.11
THUMPD2-207ENST00000530095 RIMBP3BA6NNM3 1639 aa15.73■□□□□ 0.11
THUMPD2-207ENST00000530095 RIMBP3Q9UFD9 1639 aa15.73■□□□□ 0.11
THUMPD2-207ENST00000530095 CHD1O14646 1710 aa15.7■□□□□ 0.1
THUMPD2-207ENST00000530095 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
THUMPD2-207ENST00000530095 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
THUMPD2-207ENST00000530095 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
THUMPD2-207ENST00000530095 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
THUMPD2-207ENST00000530095 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
THUMPD2-207ENST00000530095 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
THUMPD2-207ENST00000530095 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
THUMPD2-207ENST00000530095 TOPBP1Q92547 1522 aa15.6■□□□□ 0.09
THUMPD2-207ENST00000530095 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
THUMPD2-207ENST00000530095 ARHGEF11O15085 1522 aa15.58■□□□□ 0.08
THUMPD2-207ENST00000530095 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
THUMPD2-207ENST00000530095 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
THUMPD2-207ENST00000530095 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
THUMPD2-207ENST00000530095 AQRO60306 1485 aaKnown RBP eCLIP15.45■□□□□ 0.06
THUMPD2-207ENST00000530095 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
THUMPD2-207ENST00000530095 FBLN2P98095 1184 aa15.43■□□□□ 0.06
THUMPD2-207ENST00000530095 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
THUMPD2-207ENST00000530095 CYB5RLQ6IPT4 315 aa15.4■□□□□ 0.06
THUMPD2-207ENST00000530095 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
THUMPD2-207ENST00000530095 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
THUMPD2-207ENST00000530095 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
THUMPD2-207ENST00000530095 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
THUMPD2-207ENST00000530095 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms