RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
AP002008.3-201ENST00000528614 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
AP002008.3-201ENST00000528614 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
AP002008.3-201ENST00000528614 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
AP002008.3-201ENST00000528614 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
AP002008.3-201ENST00000528614 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
AP002008.3-201ENST00000528614 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
AP002008.3-201ENST00000528614 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
AP002008.3-201ENST00000528614 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
AP002008.3-201ENST00000528614 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
AP002008.3-201ENST00000528614 ABCC9O60706 1549 aa17.46■□□□□ 0.39
AP002008.3-201ENST00000528614 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
AP002008.3-201ENST00000528614 NACADO15069 1562 aa17.29■□□□□ 0.36
AP002008.3-201ENST00000528614 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
AP002008.3-201ENST00000528614 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
AP002008.3-201ENST00000528614 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
AP002008.3-201ENST00000528614 HRCP23327 699 aa17.13■□□□□ 0.33
AP002008.3-201ENST00000528614 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
AP002008.3-201ENST00000528614 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
AP002008.3-201ENST00000528614 MROH2BQ7Z745 1585 aa17.05■□□□□ 0.32
AP002008.3-201ENST00000528614 WIZO95785 1651 aa16.95■□□□□ 0.3
AP002008.3-201ENST00000528614 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
AP002008.3-201ENST00000528614 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
AP002008.3-201ENST00000528614 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
AP002008.3-201ENST00000528614 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.27
AP002008.3-201ENST00000528614 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
AP002008.3-201ENST00000528614 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.27
AP002008.3-201ENST00000528614 SMARCA4P51532 1647 aa16.71■□□□□ 0.26
AP002008.3-201ENST00000528614 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
AP002008.3-201ENST00000528614 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
AP002008.3-201ENST00000528614 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
AP002008.3-201ENST00000528614 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP002008.3-201ENST00000528614 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
AP002008.3-201ENST00000528614 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
AP002008.3-201ENST00000528614 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
AP002008.3-201ENST00000528614 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
AP002008.3-201ENST00000528614 SOGA1O94964 1423 aa16.41■□□□□ 0.22
AP002008.3-201ENST00000528614 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
AP002008.3-201ENST00000528614 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
AP002008.3-201ENST00000528614 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
AP002008.3-201ENST00000528614 EEA1Q15075 1411 aa16.32■□□□□ 0.2
AP002008.3-201ENST00000528614 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
AP002008.3-201ENST00000528614 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
AP002008.3-201ENST00000528614 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
AP002008.3-201ENST00000528614 CEP162Q5TB80 1403 aa16.29■□□□□ 0.2
AP002008.3-201ENST00000528614 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
AP002008.3-201ENST00000528614 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
AP002008.3-201ENST00000528614 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
AP002008.3-201ENST00000528614 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
AP002008.3-201ENST00000528614 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
AP002008.3-201ENST00000528614 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
AP002008.3-201ENST00000528614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
AP002008.3-201ENST00000528614 CCER1Q8TC90 406 aaPredicted RBP16.15■□□□□ 0.18
AP002008.3-201ENST00000528614 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
AP002008.3-201ENST00000528614 KIF21BO75037 1637 aa16.08■□□□□ 0.16
AP002008.3-201ENST00000528614 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
AP002008.3-201ENST00000528614 CLIP1P30622 1438 aa16.01■□□□□ 0.15
AP002008.3-201ENST00000528614 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
AP002008.3-201ENST00000528614 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
AP002008.3-201ENST00000528614 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
AP002008.3-201ENST00000528614 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
AP002008.3-201ENST00000528614 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
AP002008.3-201ENST00000528614 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
AP002008.3-201ENST00000528614 APLP2Q06481 763 aa15.89■□□□□ 0.13
AP002008.3-201ENST00000528614 CUX1P39880 1505 aa15.88■□□□□ 0.13
AP002008.3-201ENST00000528614 CFTRP13569 1480 aa15.86■□□□□ 0.13
AP002008.3-201ENST00000528614 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
AP002008.3-201ENST00000528614 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
AP002008.3-201ENST00000528614 MYT1Q01538 1121 aa15.83■□□□□ 0.13
AP002008.3-201ENST00000528614 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.13
AP002008.3-201ENST00000528614 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
AP002008.3-201ENST00000528614 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
AP002008.3-201ENST00000528614 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
AP002008.3-201ENST00000528614 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
AP002008.3-201ENST00000528614 ZNF316A6NFI3 1004 aaPredicted RBP15.72■□□□□ 0.11
AP002008.3-201ENST00000528614 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.1
AP002008.3-201ENST00000528614 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
AP002008.3-201ENST00000528614 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
AP002008.3-201ENST00000528614 IGF1RP08069 1367 aa15.66■□□□□ 0.1
AP002008.3-201ENST00000528614 CUX2O14529 1486 aa15.66■□□□□ 0.1
AP002008.3-201ENST00000528614 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
AP002008.3-201ENST00000528614 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
AP002008.3-201ENST00000528614 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
AP002008.3-201ENST00000528614 NEUROD1Q13562 356 aa15.6■□□□□ 0.09
AP002008.3-201ENST00000528614 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
AP002008.3-201ENST00000528614 CARMIL1Q5VZK9 1371 aa15.58■□□□□ 0.09
AP002008.3-201ENST00000528614 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
AP002008.3-201ENST00000528614 CENPBP07199 599 aaPredicted RBP15.54■□□□□ 0.08
AP002008.3-201ENST00000528614 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
AP002008.3-201ENST00000528614 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
AP002008.3-201ENST00000528614 CLSPNQ9HAW4 1339 aa15.53■□□□□ 0.08
AP002008.3-201ENST00000528614 CCNB3Q8WWL7 1395 aa15.5■□□□□ 0.07
AP002008.3-201ENST00000528614 MIER1Q8N108 512 aa15.47■□□□□ 0.07
AP002008.3-201ENST00000528614 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
AP002008.3-201ENST00000528614 ITGAEP38570 1179 aa15.46■□□□□ 0.07
AP002008.3-201ENST00000528614 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
AP002008.3-201ENST00000528614 MAP3K1Q13233 1512 aa15.44■□□□□ 0.06
AP002008.3-201ENST00000528614 TIAM1Q13009 1591 aa15.44■□□□□ 0.06
AP002008.3-201ENST00000528614 NESP48681 1621 aa15.44■□□□□ 0.06
AP002008.3-201ENST00000528614 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms