RNA–Protein interactions for RNA: ENST00000528248.1

PKD2L1-203, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 1 (best)

Gene PKD2L1, Length 2,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-203ENST00000528248 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
PKD2L1-203ENST00000528248 CCDC180Q9P1Z9 1646 aa26.93■■□□□ 1.9
PKD2L1-203ENST00000528248 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
PKD2L1-203ENST00000528248 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
PKD2L1-203ENST00000528248 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
PKD2L1-203ENST00000528248 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
PKD2L1-203ENST00000528248 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
PKD2L1-203ENST00000528248 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
PKD2L1-203ENST00000528248 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
PKD2L1-203ENST00000528248 ABCC9O60706 1549 aa25.17■■□□□ 1.62
PKD2L1-203ENST00000528248 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
PKD2L1-203ENST00000528248 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
PKD2L1-203ENST00000528248 NACADO15069 1562 aa24.88■■□□□ 1.57
PKD2L1-203ENST00000528248 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
PKD2L1-203ENST00000528248 HRCP23327 699 aa24.69■■□□□ 1.54
PKD2L1-203ENST00000528248 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
PKD2L1-203ENST00000528248 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
PKD2L1-203ENST00000528248 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
PKD2L1-203ENST00000528248 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
PKD2L1-203ENST00000528248 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
PKD2L1-203ENST00000528248 WIZO95785 1651 aa24.33■■□□□ 1.49
PKD2L1-203ENST00000528248 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
PKD2L1-203ENST00000528248 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
PKD2L1-203ENST00000528248 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
PKD2L1-203ENST00000528248 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
PKD2L1-203ENST00000528248 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
PKD2L1-203ENST00000528248 SMARCA4P51532 1647 aa24.03■■□□□ 1.44
PKD2L1-203ENST00000528248 PPARGC1BQ86YN6 1023 aaKnown RBP24.03■■□□□ 1.44
PKD2L1-203ENST00000528248 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
PKD2L1-203ENST00000528248 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
PKD2L1-203ENST00000528248 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
PKD2L1-203ENST00000528248 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
PKD2L1-203ENST00000528248 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
PKD2L1-203ENST00000528248 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
PKD2L1-203ENST00000528248 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
PKD2L1-203ENST00000528248 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.38
PKD2L1-203ENST00000528248 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
PKD2L1-203ENST00000528248 EEA1Q15075 1411 aa23.56■■□□□ 1.36
PKD2L1-203ENST00000528248 SOGA1O94964 1423 aa23.52■■□□□ 1.36
PKD2L1-203ENST00000528248 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
PKD2L1-203ENST00000528248 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
PKD2L1-203ENST00000528248 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
PKD2L1-203ENST00000528248 CEP162Q5TB80 1403 aa23.43■■□□□ 1.34
PKD2L1-203ENST00000528248 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
PKD2L1-203ENST00000528248 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
PKD2L1-203ENST00000528248 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
PKD2L1-203ENST00000528248 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
PKD2L1-203ENST00000528248 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
PKD2L1-203ENST00000528248 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
PKD2L1-203ENST00000528248 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
PKD2L1-203ENST00000528248 KIF21BO75037 1637 aa23.2■■□□□ 1.31
PKD2L1-203ENST00000528248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.19■■□□□ 1.3
PKD2L1-203ENST00000528248 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
PKD2L1-203ENST00000528248 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
PKD2L1-203ENST00000528248 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
PKD2L1-203ENST00000528248 CLIP1P30622 1438 aa23.02■■□□□ 1.28
PKD2L1-203ENST00000528248 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
PKD2L1-203ENST00000528248 NCAPD3P42695 1498 aa23■■□□□ 1.27
PKD2L1-203ENST00000528248 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
PKD2L1-203ENST00000528248 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
PKD2L1-203ENST00000528248 VPS8Q8N3P4 1428 aa22.94■■□□□ 1.26
PKD2L1-203ENST00000528248 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
PKD2L1-203ENST00000528248 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
PKD2L1-203ENST00000528248 APLP2Q06481 763 aa22.81■■□□□ 1.24
PKD2L1-203ENST00000528248 CUX1P39880 1505 aa22.8■■□□□ 1.24
PKD2L1-203ENST00000528248 CFTRP13569 1480 aa22.79■■□□□ 1.24
PKD2L1-203ENST00000528248 DIEXFQ68CQ4 756 aaKnown RBP22.73■■□□□ 1.23
PKD2L1-203ENST00000528248 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
PKD2L1-203ENST00000528248 HNRNPUL2Q1KMD3 747 aaKnown RBP22.69■■□□□ 1.22
PKD2L1-203ENST00000528248 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
PKD2L1-203ENST00000528248 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
PKD2L1-203ENST00000528248 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
PKD2L1-203ENST00000528248 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
PKD2L1-203ENST00000528248 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
PKD2L1-203ENST00000528248 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
PKD2L1-203ENST00000528248 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
PKD2L1-203ENST00000528248 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
PKD2L1-203ENST00000528248 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
PKD2L1-203ENST00000528248 CUX2O14529 1486 aa22.45■■□□□ 1.19
PKD2L1-203ENST00000528248 CENPBP07199 599 aaPredicted RBP22.45■■□□□ 1.18
PKD2L1-203ENST00000528248 IGF1RP08069 1367 aa22.45■■□□□ 1.18
PKD2L1-203ENST00000528248 NEUROD1Q13562 356 aa22.44■■□□□ 1.18
PKD2L1-203ENST00000528248 CLSPNQ9HAW4 1339 aa22.44■■□□□ 1.18
PKD2L1-203ENST00000528248 RRBP1Q9P2E9 1410 aaKnown RBP22.42■■□□□ 1.18
PKD2L1-203ENST00000528248 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
PKD2L1-203ENST00000528248 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
PKD2L1-203ENST00000528248 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
PKD2L1-203ENST00000528248 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
PKD2L1-203ENST00000528248 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
PKD2L1-203ENST00000528248 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
PKD2L1-203ENST00000528248 PELP1Q8IZL8 1130 aaKnown RBP22.29■■□□□ 1.16
PKD2L1-203ENST00000528248 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
PKD2L1-203ENST00000528248 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
PKD2L1-203ENST00000528248 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
PKD2L1-203ENST00000528248 MIER1Q8N108 512 aa22.21■■□□□ 1.15
PKD2L1-203ENST00000528248 GTF3C3Q9Y5Q9 886 aa22.21■■□□□ 1.15
PKD2L1-203ENST00000528248 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
PKD2L1-203ENST00000528248 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
PKD2L1-203ENST00000528248 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
PKD2L1-203ENST00000528248 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms