RNA–Protein interactions for RNA: ENST00000527687.1

GRIA4-211, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 3

Gene GRIA4, Length 698 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-211ENST00000527687 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
GRIA4-211ENST00000527687 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
GRIA4-211ENST00000527687 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
GRIA4-211ENST00000527687 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
GRIA4-211ENST00000527687 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
GRIA4-211ENST00000527687 FOXD1Q16676 465 aa19.1■□□□□ 0.65
GRIA4-211ENST00000527687 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
GRIA4-211ENST00000527687 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
GRIA4-211ENST00000527687 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
GRIA4-211ENST00000527687 ADRA2BP18089 450 aa18.13■□□□□ 0.49
GRIA4-211ENST00000527687 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
GRIA4-211ENST00000527687 ABCC9O60706 1549 aa17.87■□□□□ 0.45
GRIA4-211ENST00000527687 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
GRIA4-211ENST00000527687 MSH5O43196 834 aa17.73■□□□□ 0.43
GRIA4-211ENST00000527687 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
GRIA4-211ENST00000527687 NACADO15069 1562 aa17.09■□□□□ 0.33
GRIA4-211ENST00000527687 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
GRIA4-211ENST00000527687 MYO15BQ96JP2 1530 aa17.04■□□□□ 0.32
GRIA4-211ENST00000527687 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
GRIA4-211ENST00000527687 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
GRIA4-211ENST00000527687 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
GRIA4-211ENST00000527687 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
GRIA4-211ENST00000527687 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
GRIA4-211ENST00000527687 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
GRIA4-211ENST00000527687 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
GRIA4-211ENST00000527687 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
GRIA4-211ENST00000527687 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
GRIA4-211ENST00000527687 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
GRIA4-211ENST00000527687 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
GRIA4-211ENST00000527687 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
GRIA4-211ENST00000527687 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
GRIA4-211ENST00000527687 EIF4G1Q04637 1599 aaKnown RBP16.14■□□□□ 0.17
GRIA4-211ENST00000527687 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
GRIA4-211ENST00000527687 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
GRIA4-211ENST00000527687 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
GRIA4-211ENST00000527687 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
GRIA4-211ENST00000527687 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
GRIA4-211ENST00000527687 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
GRIA4-211ENST00000527687 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
GRIA4-211ENST00000527687 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
GRIA4-211ENST00000527687 KCNA4P22459 653 aa15.83■□□□□ 0.12
GRIA4-211ENST00000527687 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
GRIA4-211ENST00000527687 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
GRIA4-211ENST00000527687 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
GRIA4-211ENST00000527687 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
GRIA4-211ENST00000527687 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
GRIA4-211ENST00000527687 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
GRIA4-211ENST00000527687 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
GRIA4-211ENST00000527687 WIZO95785 1651 aa15.7■□□□□ 0.1
GRIA4-211ENST00000527687 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
GRIA4-211ENST00000527687 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
GRIA4-211ENST00000527687 CUX2O14529 1486 aa15.56■□□□□ 0.08
GRIA4-211ENST00000527687 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
GRIA4-211ENST00000527687 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
GRIA4-211ENST00000527687 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
GRIA4-211ENST00000527687 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
GRIA4-211ENST00000527687 NESP48681 1621 aa15.37■□□□□ 0.05
GRIA4-211ENST00000527687 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
GRIA4-211ENST00000527687 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
GRIA4-211ENST00000527687 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
GRIA4-211ENST00000527687 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
GRIA4-211ENST00000527687 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
GRIA4-211ENST00000527687 CFTRP13569 1480 aa15.24■□□□□ 0.03
GRIA4-211ENST00000527687 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
GRIA4-211ENST00000527687 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
GRIA4-211ENST00000527687 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
GRIA4-211ENST00000527687 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
GRIA4-211ENST00000527687 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
GRIA4-211ENST00000527687 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
GRIA4-211ENST00000527687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 0
GRIA4-211ENST00000527687 MRC2Q9UBG0 1479 aa15.05■□□□□ -0
GRIA4-211ENST00000527687 WDR62O43379 1518 aa15.04■□□□□ -0
GRIA4-211ENST00000527687 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
GRIA4-211ENST00000527687 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
GRIA4-211ENST00000527687 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
GRIA4-211ENST00000527687 DNMBPQ6XZF7 1577 aa14.92□□□□□ -0.02
GRIA4-211ENST00000527687 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
GRIA4-211ENST00000527687 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
GRIA4-211ENST00000527687 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
GRIA4-211ENST00000527687 CUX1P39880 1505 aa14.87□□□□□ -0.03
GRIA4-211ENST00000527687 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
GRIA4-211ENST00000527687 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
GRIA4-211ENST00000527687 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
GRIA4-211ENST00000527687 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
GRIA4-211ENST00000527687 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
GRIA4-211ENST00000527687 SYNJ1O43426 1573 aa14.79□□□□□ -0.04
GRIA4-211ENST00000527687 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
GRIA4-211ENST00000527687 TOP2BQ02880 1626 aa14.77□□□□□ -0.05
GRIA4-211ENST00000527687 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
GRIA4-211ENST00000527687 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
GRIA4-211ENST00000527687 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
GRIA4-211ENST00000527687 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
GRIA4-211ENST00000527687 ZNF608Q9ULD9 1512 aaPredicted RBP14.72□□□□□ -0.05
GRIA4-211ENST00000527687 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
GRIA4-211ENST00000527687 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
GRIA4-211ENST00000527687 SOGA1O94964 1423 aa14.66□□□□□ -0.06
GRIA4-211ENST00000527687 ABCA10Q8WWZ4 1543 aa14.64□□□□□ -0.07
GRIA4-211ENST00000527687 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
GRIA4-211ENST00000527687 ZBTB22O15209 634 aa14.61□□□□□ -0.07
GRIA4-211ENST00000527687 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms