RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
COMMD9-204ENST00000526789 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
COMMD9-204ENST00000526789 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
COMMD9-204ENST00000526789 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
COMMD9-204ENST00000526789 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
COMMD9-204ENST00000526789 FOXD1Q16676 465 aa19.33■□□□□ 0.68
COMMD9-204ENST00000526789 MSH5O43196 834 aa18.37■□□□□ 0.53
COMMD9-204ENST00000526789 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
COMMD9-204ENST00000526789 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
COMMD9-204ENST00000526789 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
COMMD9-204ENST00000526789 ADRA2BP18089 450 aa17.37■□□□□ 0.37
COMMD9-204ENST00000526789 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
COMMD9-204ENST00000526789 ABCC9O60706 1549 aa16.87■□□□□ 0.29
COMMD9-204ENST00000526789 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
COMMD9-204ENST00000526789 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
COMMD9-204ENST00000526789 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
COMMD9-204ENST00000526789 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
COMMD9-204ENST00000526789 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
COMMD9-204ENST00000526789 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
COMMD9-204ENST00000526789 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
COMMD9-204ENST00000526789 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
COMMD9-204ENST00000526789 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
COMMD9-204ENST00000526789 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
COMMD9-204ENST00000526789 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
COMMD9-204ENST00000526789 NACADO15069 1562 aa15.53■□□□□ 0.08
COMMD9-204ENST00000526789 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
COMMD9-204ENST00000526789 KCNA4P22459 653 aa15.33■□□□□ 0.04
COMMD9-204ENST00000526789 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
COMMD9-204ENST00000526789 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
COMMD9-204ENST00000526789 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
COMMD9-204ENST00000526789 BICRAQ9NZM4 1560 aa15.25■□□□□ 0.03
COMMD9-204ENST00000526789 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
COMMD9-204ENST00000526789 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
COMMD9-204ENST00000526789 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
COMMD9-204ENST00000526789 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
COMMD9-204ENST00000526789 POTEHQ6S545 545 aa15□□□□□ -0.01
COMMD9-204ENST00000526789 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
COMMD9-204ENST00000526789 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
COMMD9-204ENST00000526789 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
COMMD9-204ENST00000526789 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
COMMD9-204ENST00000526789 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
COMMD9-204ENST00000526789 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
COMMD9-204ENST00000526789 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
COMMD9-204ENST00000526789 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
COMMD9-204ENST00000526789 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
COMMD9-204ENST00000526789 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
COMMD9-204ENST00000526789 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
COMMD9-204ENST00000526789 CUX2O14529 1486 aa14.63□□□□□ -0.07
COMMD9-204ENST00000526789 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
COMMD9-204ENST00000526789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
COMMD9-204ENST00000526789 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
COMMD9-204ENST00000526789 DSG3P32926 999 aa14.36□□□□□ -0.11
COMMD9-204ENST00000526789 NESP48681 1621 aa14.33□□□□□ -0.12
COMMD9-204ENST00000526789 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
COMMD9-204ENST00000526789 CAPN15O75808 1086 aa14.28□□□□□ -0.12
COMMD9-204ENST00000526789 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
COMMD9-204ENST00000526789 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
COMMD9-204ENST00000526789 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
COMMD9-204ENST00000526789 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
COMMD9-204ENST00000526789 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
COMMD9-204ENST00000526789 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
COMMD9-204ENST00000526789 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
COMMD9-204ENST00000526789 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
COMMD9-204ENST00000526789 ZBTB22O15209 634 aa14.14□□□□□ -0.15
COMMD9-204ENST00000526789 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
COMMD9-204ENST00000526789 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
COMMD9-204ENST00000526789 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
COMMD9-204ENST00000526789 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
COMMD9-204ENST00000526789 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
COMMD9-204ENST00000526789 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
COMMD9-204ENST00000526789 OSCARQ8IYS5 282 aa14□□□□□ -0.17
COMMD9-204ENST00000526789 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
COMMD9-204ENST00000526789 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
COMMD9-204ENST00000526789 WDR62O43379 1518 aa13.9□□□□□ -0.18
COMMD9-204ENST00000526789 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
COMMD9-204ENST00000526789 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
COMMD9-204ENST00000526789 ABCB7O75027 752 aa13.88□□□□□ -0.19
COMMD9-204ENST00000526789 MROH2BQ7Z745 1585 aa13.87□□□□□ -0.19
COMMD9-204ENST00000526789 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
COMMD9-204ENST00000526789 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
COMMD9-204ENST00000526789 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
COMMD9-204ENST00000526789 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
COMMD9-204ENST00000526789 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
COMMD9-204ENST00000526789 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
COMMD9-204ENST00000526789 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
COMMD9-204ENST00000526789 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
COMMD9-204ENST00000526789 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
COMMD9-204ENST00000526789 WIZO95785 1651 aa13.72□□□□□ -0.21
COMMD9-204ENST00000526789 ARHGEF11O15085 1522 aa13.7□□□□□ -0.22
COMMD9-204ENST00000526789 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
COMMD9-204ENST00000526789 APLP2Q06481 763 aa13.68□□□□□ -0.22
COMMD9-204ENST00000526789 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
COMMD9-204ENST00000526789 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
COMMD9-204ENST00000526789 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
COMMD9-204ENST00000526789 FBLN2P98095 1184 aa13.64□□□□□ -0.23
COMMD9-204ENST00000526789 CFTRP13569 1480 aa13.62□□□□□ -0.23
COMMD9-204ENST00000526789 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
COMMD9-204ENST00000526789 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
COMMD9-204ENST00000526789 ARAP1Q96P48 1450 aa13.52□□□□□ -0.25
COMMD9-204ENST00000526789 CHD1O14646 1710 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms