RNA–Protein interactions for RNA: ENST00000525969.1

PATE1-203, Transcript of prostate and testis expressed 1, humanhuman

TSL 3

Gene PATE1, Length 1,079 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATE1-203ENST00000525969 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
PATE1-203ENST00000525969 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
PATE1-203ENST00000525969 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
PATE1-203ENST00000525969 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
PATE1-203ENST00000525969 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
PATE1-203ENST00000525969 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
PATE1-203ENST00000525969 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
PATE1-203ENST00000525969 ABCC9O60706 1549 aa19.2■□□□□ 0.66
PATE1-203ENST00000525969 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
PATE1-203ENST00000525969 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
PATE1-203ENST00000525969 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
PATE1-203ENST00000525969 ADRA2BP18089 450 aa18.39■□□□□ 0.53
PATE1-203ENST00000525969 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
PATE1-203ENST00000525969 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
PATE1-203ENST00000525969 NACADO15069 1562 aa18.3■□□□□ 0.52
PATE1-203ENST00000525969 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
PATE1-203ENST00000525969 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
PATE1-203ENST00000525969 FOXD1Q16676 465 aa18.2■□□□□ 0.5
PATE1-203ENST00000525969 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
PATE1-203ENST00000525969 KCNA4P22459 653 aa17.98■□□□□ 0.47
PATE1-203ENST00000525969 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
PATE1-203ENST00000525969 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
PATE1-203ENST00000525969 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
PATE1-203ENST00000525969 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
PATE1-203ENST00000525969 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
PATE1-203ENST00000525969 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
PATE1-203ENST00000525969 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.41
PATE1-203ENST00000525969 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
PATE1-203ENST00000525969 CECR2Q9BXF3 1484 aa17.38■□□□□ 0.37
PATE1-203ENST00000525969 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
PATE1-203ENST00000525969 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
PATE1-203ENST00000525969 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.37
PATE1-203ENST00000525969 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
PATE1-203ENST00000525969 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
PATE1-203ENST00000525969 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
PATE1-203ENST00000525969 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
PATE1-203ENST00000525969 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
PATE1-203ENST00000525969 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
PATE1-203ENST00000525969 WIZO95785 1651 aa17.19■□□□□ 0.34
PATE1-203ENST00000525969 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
PATE1-203ENST00000525969 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
PATE1-203ENST00000525969 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
PATE1-203ENST00000525969 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
PATE1-203ENST00000525969 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
PATE1-203ENST00000525969 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
PATE1-203ENST00000525969 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
PATE1-203ENST00000525969 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
PATE1-203ENST00000525969 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
PATE1-203ENST00000525969 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
PATE1-203ENST00000525969 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
PATE1-203ENST00000525969 EEA1Q15075 1411 aa16.63■□□□□ 0.25
PATE1-203ENST00000525969 ZBTB22O15209 634 aa16.62■□□□□ 0.25
PATE1-203ENST00000525969 CUX2O14529 1486 aa16.61■□□□□ 0.25
PATE1-203ENST00000525969 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
PATE1-203ENST00000525969 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
PATE1-203ENST00000525969 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
PATE1-203ENST00000525969 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
PATE1-203ENST00000525969 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
PATE1-203ENST00000525969 CFTRP13569 1480 aa16.52■□□□□ 0.23
PATE1-203ENST00000525969 NESP48681 1621 aa16.48■□□□□ 0.23
PATE1-203ENST00000525969 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
PATE1-203ENST00000525969 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
PATE1-203ENST00000525969 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
PATE1-203ENST00000525969 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
PATE1-203ENST00000525969 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
PATE1-203ENST00000525969 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
PATE1-203ENST00000525969 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
PATE1-203ENST00000525969 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
PATE1-203ENST00000525969 MSH5O43196 834 aa16.33■□□□□ 0.2
PATE1-203ENST00000525969 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
PATE1-203ENST00000525969 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
PATE1-203ENST00000525969 SOGA1O94964 1423 aa16.3■□□□□ 0.2
PATE1-203ENST00000525969 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
PATE1-203ENST00000525969 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
PATE1-203ENST00000525969 KIF21BO75037 1637 aa16.28■□□□□ 0.2
PATE1-203ENST00000525969 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
PATE1-203ENST00000525969 GOLGA3Q08378 1498 aa16.27■□□□□ 0.19
PATE1-203ENST00000525969 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
PATE1-203ENST00000525969 CUX1P39880 1505 aa16.24■□□□□ 0.19
PATE1-203ENST00000525969 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
PATE1-203ENST00000525969 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
PATE1-203ENST00000525969 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
PATE1-203ENST00000525969 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
PATE1-203ENST00000525969 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
PATE1-203ENST00000525969 RUSC2Q8N2Y8 1516 aa16.16■□□□□ 0.18
PATE1-203ENST00000525969 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
PATE1-203ENST00000525969 WDR62O43379 1518 aa16.14■□□□□ 0.18
PATE1-203ENST00000525969 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
PATE1-203ENST00000525969 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
PATE1-203ENST00000525969 PRXQ9BXM0 1461 aa16.11■□□□□ 0.17
PATE1-203ENST00000525969 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
PATE1-203ENST00000525969 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
PATE1-203ENST00000525969 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
PATE1-203ENST00000525969 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
PATE1-203ENST00000525969 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
PATE1-203ENST00000525969 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
PATE1-203ENST00000525969 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
PATE1-203ENST00000525969 CLIP1P30622 1438 aa15.97■□□□□ 0.15
PATE1-203ENST00000525969 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
PATE1-203ENST00000525969 IGF1RP08069 1367 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms