RNA–Protein interactions for RNA: ENST00000524592.1

YPEL4-202, Transcript of yippee like 4, humanhuman

TSL 1 (best)

Gene YPEL4, Length 1,893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL4-202ENST00000524592 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
YPEL4-202ENST00000524592 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
YPEL4-202ENST00000524592 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
YPEL4-202ENST00000524592 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
YPEL4-202ENST00000524592 HRCP23327 699 aa22.34■■□□□ 1.17
YPEL4-202ENST00000524592 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
YPEL4-202ENST00000524592 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
YPEL4-202ENST00000524592 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
YPEL4-202ENST00000524592 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
YPEL4-202ENST00000524592 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
YPEL4-202ENST00000524592 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
YPEL4-202ENST00000524592 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
YPEL4-202ENST00000524592 ABCC9O60706 1549 aa21.39■■□□□ 1.01
YPEL4-202ENST00000524592 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
YPEL4-202ENST00000524592 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
YPEL4-202ENST00000524592 LOC105371045A0A1W2PR82 267 aa21.23■□□□□ 0.99
YPEL4-202ENST00000524592 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
YPEL4-202ENST00000524592 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
YPEL4-202ENST00000524592 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
YPEL4-202ENST00000524592 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
YPEL4-202ENST00000524592 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
YPEL4-202ENST00000524592 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
YPEL4-202ENST00000524592 NACADO15069 1562 aa20.59■□□□□ 0.89
YPEL4-202ENST00000524592 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
YPEL4-202ENST00000524592 MYT1Q01538 1121 aa20.55■□□□□ 0.88
YPEL4-202ENST00000524592 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
YPEL4-202ENST00000524592 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
YPEL4-202ENST00000524592 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
YPEL4-202ENST00000524592 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
YPEL4-202ENST00000524592 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
YPEL4-202ENST00000524592 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
YPEL4-202ENST00000524592 WIZO95785 1651 aa20.37■□□□□ 0.85
YPEL4-202ENST00000524592 CENPBP07199 599 aaPredicted RBP20.36■□□□□ 0.85
YPEL4-202ENST00000524592 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
YPEL4-202ENST00000524592 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
YPEL4-202ENST00000524592 EEA1Q15075 1411 aa20.28■□□□□ 0.84
YPEL4-202ENST00000524592 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
YPEL4-202ENST00000524592 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
YPEL4-202ENST00000524592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
YPEL4-202ENST00000524592 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
YPEL4-202ENST00000524592 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
YPEL4-202ENST00000524592 GTF3C3Q9Y5Q9 886 aa20.13■□□□□ 0.81
YPEL4-202ENST00000524592 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
YPEL4-202ENST00000524592 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
YPEL4-202ENST00000524592 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
YPEL4-202ENST00000524592 ZNF316A6NFI3 1004 aaPredicted RBP20.05■□□□□ 0.8
YPEL4-202ENST00000524592 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
YPEL4-202ENST00000524592 GOLGA3Q08378 1498 aa20■□□□□ 0.79
YPEL4-202ENST00000524592 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
YPEL4-202ENST00000524592 SOGA1O94964 1423 aa19.93■□□□□ 0.78
YPEL4-202ENST00000524592 KIF21BO75037 1637 aa19.93■□□□□ 0.78
YPEL4-202ENST00000524592 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
YPEL4-202ENST00000524592 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
YPEL4-202ENST00000524592 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
YPEL4-202ENST00000524592 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
YPEL4-202ENST00000524592 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
YPEL4-202ENST00000524592 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
YPEL4-202ENST00000524592 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
YPEL4-202ENST00000524592 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
YPEL4-202ENST00000524592 UBTFP17480 764 aaKnown RBP19.71■□□□□ 0.75
YPEL4-202ENST00000524592 CLIP1P30622 1438 aa19.7■□□□□ 0.74
YPEL4-202ENST00000524592 MIER1Q8N108 512 aa19.69■□□□□ 0.74
YPEL4-202ENST00000524592 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
YPEL4-202ENST00000524592 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
YPEL4-202ENST00000524592 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
YPEL4-202ENST00000524592 CUX2O14529 1486 aa19.54■□□□□ 0.72
YPEL4-202ENST00000524592 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.72
YPEL4-202ENST00000524592 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
YPEL4-202ENST00000524592 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
YPEL4-202ENST00000524592 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
YPEL4-202ENST00000524592 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
YPEL4-202ENST00000524592 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
YPEL4-202ENST00000524592 APLP2Q06481 763 aa19.47■□□□□ 0.71
YPEL4-202ENST00000524592 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
YPEL4-202ENST00000524592 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
YPEL4-202ENST00000524592 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
YPEL4-202ENST00000524592 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
YPEL4-202ENST00000524592 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
YPEL4-202ENST00000524592 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
YPEL4-202ENST00000524592 MAP3K1Q13233 1512 aa19.27■□□□□ 0.68
YPEL4-202ENST00000524592 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
YPEL4-202ENST00000524592 TSHZ2Q9NRE2 1034 aa19.19■□□□□ 0.66
YPEL4-202ENST00000524592 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
YPEL4-202ENST00000524592 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
YPEL4-202ENST00000524592 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
YPEL4-202ENST00000524592 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
YPEL4-202ENST00000524592 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
YPEL4-202ENST00000524592 ARHGAP35Q9NRY4 1499 aa19.11■□□□□ 0.65
YPEL4-202ENST00000524592 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
YPEL4-202ENST00000524592 CUX1P39880 1505 aa19.07■□□□□ 0.64
YPEL4-202ENST00000524592 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
YPEL4-202ENST00000524592 RAB3GAP2Q9H2M9 1393 aa19.03■□□□□ 0.64
YPEL4-202ENST00000524592 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
YPEL4-202ENST00000524592 NCAPD3P42695 1498 aa19.01■□□□□ 0.63
YPEL4-202ENST00000524592 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
YPEL4-202ENST00000524592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.98■□□□□ 0.63
YPEL4-202ENST00000524592 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.63
YPEL4-202ENST00000524592 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
YPEL4-202ENST00000524592 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
YPEL4-202ENST00000524592 CFTRP13569 1480 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms