RNA–Protein interactions for RNA: ENST00000523435.1

PTK2-244, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-244ENST00000523435 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
PTK2-244ENST00000523435 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
PTK2-244ENST00000523435 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
PTK2-244ENST00000523435 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
PTK2-244ENST00000523435 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
PTK2-244ENST00000523435 FOXD1Q16676 465 aa16.9■□□□□ 0.3
PTK2-244ENST00000523435 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
PTK2-244ENST00000523435 ABCC9O60706 1549 aa16.07■□□□□ 0.16
PTK2-244ENST00000523435 MSH5O43196 834 aa16.04■□□□□ 0.16
PTK2-244ENST00000523435 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
PTK2-244ENST00000523435 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
PTK2-244ENST00000523435 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
PTK2-244ENST00000523435 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
PTK2-244ENST00000523435 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
PTK2-244ENST00000523435 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
PTK2-244ENST00000523435 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
PTK2-244ENST00000523435 ADRA2BP18089 450 aa15.47■□□□□ 0.07
PTK2-244ENST00000523435 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
PTK2-244ENST00000523435 NACADO15069 1562 aa15.36■□□□□ 0.05
PTK2-244ENST00000523435 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
PTK2-244ENST00000523435 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
PTK2-244ENST00000523435 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
PTK2-244ENST00000523435 SCRIBQ14160 1630 aa15□□□□□ -0.01
PTK2-244ENST00000523435 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTK2-244ENST00000523435 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
PTK2-244ENST00000523435 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
PTK2-244ENST00000523435 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
PTK2-244ENST00000523435 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
PTK2-244ENST00000523435 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
PTK2-244ENST00000523435 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
PTK2-244ENST00000523435 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
PTK2-244ENST00000523435 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
PTK2-244ENST00000523435 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
PTK2-244ENST00000523435 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
PTK2-244ENST00000523435 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
PTK2-244ENST00000523435 WIZO95785 1651 aa14.41□□□□□ -0.1
PTK2-244ENST00000523435 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
PTK2-244ENST00000523435 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
PTK2-244ENST00000523435 DMRT2Q9Y5R5 561 aa14.37□□□□□ -0.11
PTK2-244ENST00000523435 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
PTK2-244ENST00000523435 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
PTK2-244ENST00000523435 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
PTK2-244ENST00000523435 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
PTK2-244ENST00000523435 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
PTK2-244ENST00000523435 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
PTK2-244ENST00000523435 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
PTK2-244ENST00000523435 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
PTK2-244ENST00000523435 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
PTK2-244ENST00000523435 CUX2O14529 1486 aa14.04□□□□□ -0.16
PTK2-244ENST00000523435 EEA1Q15075 1411 aa13.9□□□□□ -0.18
PTK2-244ENST00000523435 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
PTK2-244ENST00000523435 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
PTK2-244ENST00000523435 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
PTK2-244ENST00000523435 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
PTK2-244ENST00000523435 CFTRP13569 1480 aa13.84□□□□□ -0.19
PTK2-244ENST00000523435 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
PTK2-244ENST00000523435 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
PTK2-244ENST00000523435 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
PTK2-244ENST00000523435 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
PTK2-244ENST00000523435 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
PTK2-244ENST00000523435 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
PTK2-244ENST00000523435 SYNJ1O43426 1573 aa13.72□□□□□ -0.21
PTK2-244ENST00000523435 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
PTK2-244ENST00000523435 NESP48681 1621 aa13.7□□□□□ -0.22
PTK2-244ENST00000523435 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
PTK2-244ENST00000523435 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
PTK2-244ENST00000523435 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
PTK2-244ENST00000523435 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
PTK2-244ENST00000523435 KIF21BO75037 1637 aa13.62□□□□□ -0.23
PTK2-244ENST00000523435 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
PTK2-244ENST00000523435 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
PTK2-244ENST00000523435 SOGA1O94964 1423 aa13.62□□□□□ -0.23
PTK2-244ENST00000523435 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
PTK2-244ENST00000523435 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
PTK2-244ENST00000523435 CUX1P39880 1505 aa13.6□□□□□ -0.23
PTK2-244ENST00000523435 GOLGA3Q08378 1498 aa13.6□□□□□ -0.23
PTK2-244ENST00000523435 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
PTK2-244ENST00000523435 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
PTK2-244ENST00000523435 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
PTK2-244ENST00000523435 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
PTK2-244ENST00000523435 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
PTK2-244ENST00000523435 PDS5BQ9NTI5 1447 aa13.52□□□□□ -0.25
PTK2-244ENST00000523435 DNMBPQ6XZF7 1577 aa13.52□□□□□ -0.25
PTK2-244ENST00000523435 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
PTK2-244ENST00000523435 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
PTK2-244ENST00000523435 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
PTK2-244ENST00000523435 CEP162Q5TB80 1403 aa13.46□□□□□ -0.26
PTK2-244ENST00000523435 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
PTK2-244ENST00000523435 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
PTK2-244ENST00000523435 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
PTK2-244ENST00000523435 TOPBP1Q92547 1522 aa13.43□□□□□ -0.26
PTK2-244ENST00000523435 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
PTK2-244ENST00000523435 UBTFP17480 764 aaKnown RBP13.41□□□□□ -0.26
PTK2-244ENST00000523435 WDR62O43379 1518 aa13.38□□□□□ -0.27
PTK2-244ENST00000523435 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
PTK2-244ENST00000523435 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
PTK2-244ENST00000523435 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
PTK2-244ENST00000523435 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
PTK2-244ENST00000523435 IGF1RP08069 1367 aa13.33□□□□□ -0.27
PTK2-244ENST00000523435 CLIP1P30622 1438 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms