RNA–Protein interactions for RNA: ENST00000522590.1

IPCEF1-213, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 2

Gene IPCEF1, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-213ENST00000522590 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.24
IPCEF1-213ENST00000522590 ABCC9O60706 1549 aa15.58■□□□□ 0.08
IPCEF1-213ENST00000522590 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
IPCEF1-213ENST00000522590 MYT1Q01538 1121 aa15.42■□□□□ 0.06
IPCEF1-213ENST00000522590 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
IPCEF1-213ENST00000522590 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
IPCEF1-213ENST00000522590 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
IPCEF1-213ENST00000522590 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
IPCEF1-213ENST00000522590 RB1CC1Q8TDY2 1594 aa14.67□□□□□ -0.06
IPCEF1-213ENST00000522590 PRKCSHP14314 528 aaPredicted RBP14.5□□□□□ -0.09
IPCEF1-213ENST00000522590 NACADO15069 1562 aa14.45□□□□□ -0.1
IPCEF1-213ENST00000522590 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
IPCEF1-213ENST00000522590 ERICH6Q7L0X2 663 aa14.38□□□□□ -0.11
IPCEF1-213ENST00000522590 APLP2Q06481 763 aa14.35□□□□□ -0.11
IPCEF1-213ENST00000522590 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
IPCEF1-213ENST00000522590 UNC13AQ9UPW8 1703 aa14.23□□□□□ -0.13
IPCEF1-213ENST00000522590 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
IPCEF1-213ENST00000522590 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
IPCEF1-213ENST00000522590 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
IPCEF1-213ENST00000522590 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
IPCEF1-213ENST00000522590 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
IPCEF1-213ENST00000522590 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
IPCEF1-213ENST00000522590 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
IPCEF1-213ENST00000522590 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
IPCEF1-213ENST00000522590 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
IPCEF1-213ENST00000522590 CUX2O14529 1486 aa13.74□□□□□ -0.21
IPCEF1-213ENST00000522590 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
IPCEF1-213ENST00000522590 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
IPCEF1-213ENST00000522590 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
IPCEF1-213ENST00000522590 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
IPCEF1-213ENST00000522590 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
IPCEF1-213ENST00000522590 HRCP23327 699 aa13.54□□□□□ -0.24
IPCEF1-213ENST00000522590 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
IPCEF1-213ENST00000522590 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
IPCEF1-213ENST00000522590 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
IPCEF1-213ENST00000522590 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
IPCEF1-213ENST00000522590 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
IPCEF1-213ENST00000522590 THOC2Q8NI27 1593 aaKnown RBP13.23□□□□□ -0.29
IPCEF1-213ENST00000522590 NESP48681 1621 aa13.21□□□□□ -0.3
IPCEF1-213ENST00000522590 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
IPCEF1-213ENST00000522590 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
IPCEF1-213ENST00000522590 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
IPCEF1-213ENST00000522590 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
IPCEF1-213ENST00000522590 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
IPCEF1-213ENST00000522590 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.31
IPCEF1-213ENST00000522590 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
IPCEF1-213ENST00000522590 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
IPCEF1-213ENST00000522590 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
IPCEF1-213ENST00000522590 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.32
IPCEF1-213ENST00000522590 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
IPCEF1-213ENST00000522590 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
IPCEF1-213ENST00000522590 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
IPCEF1-213ENST00000522590 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
IPCEF1-213ENST00000522590 WDR62O43379 1518 aa12.95□□□□□ -0.34
IPCEF1-213ENST00000522590 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
IPCEF1-213ENST00000522590 ANP32EQ9BTT0 268 aa12.93□□□□□ -0.34
IPCEF1-213ENST00000522590 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
IPCEF1-213ENST00000522590 ARXQ96QS3 562 aa12.89□□□□□ -0.35
IPCEF1-213ENST00000522590 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
IPCEF1-213ENST00000522590 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
IPCEF1-213ENST00000522590 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
IPCEF1-213ENST00000522590 RIMBP3CA6NJZ7 1639 aa12.83□□□□□ -0.36
IPCEF1-213ENST00000522590 RIMBP3BA6NNM3 1639 aa12.83□□□□□ -0.36
IPCEF1-213ENST00000522590 RIMBP3Q9UFD9 1639 aa12.83□□□□□ -0.36
IPCEF1-213ENST00000522590 ACIN1Q9UKV3 1341 aaKnown RBP12.81□□□□□ -0.36
IPCEF1-213ENST00000522590 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
IPCEF1-213ENST00000522590 AEBP2Q6ZN18 517 aaPredicted RBP12.78□□□□□ -0.36
IPCEF1-213ENST00000522590 ARHGEF11O15085 1522 aa12.76□□□□□ -0.37
IPCEF1-213ENST00000522590 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
IPCEF1-213ENST00000522590 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
IPCEF1-213ENST00000522590 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
IPCEF1-213ENST00000522590 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
IPCEF1-213ENST00000522590 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
IPCEF1-213ENST00000522590 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
IPCEF1-213ENST00000522590 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
IPCEF1-213ENST00000522590 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
IPCEF1-213ENST00000522590 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
IPCEF1-213ENST00000522590 CFTRP13569 1480 aa12.64□□□□□ -0.39
IPCEF1-213ENST00000522590 URB2Q14146 1524 aaKnown RBP12.64□□□□□ -0.39
IPCEF1-213ENST00000522590 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
IPCEF1-213ENST00000522590 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
IPCEF1-213ENST00000522590 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
IPCEF1-213ENST00000522590 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
IPCEF1-213ENST00000522590 NEUROD1Q13562 356 aa12.58□□□□□ -0.39
IPCEF1-213ENST00000522590 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
IPCEF1-213ENST00000522590 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
IPCEF1-213ENST00000522590 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
IPCEF1-213ENST00000522590 WIZO95785 1651 aa12.53□□□□□ -0.4
IPCEF1-213ENST00000522590 NEFLP07196 543 aa12.5□□□□□ -0.41
IPCEF1-213ENST00000522590 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
IPCEF1-213ENST00000522590 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
IPCEF1-213ENST00000522590 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
IPCEF1-213ENST00000522590 CHD1O14646 1710 aa12.46□□□□□ -0.42
IPCEF1-213ENST00000522590 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
IPCEF1-213ENST00000522590 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
IPCEF1-213ENST00000522590 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
IPCEF1-213ENST00000522590 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
IPCEF1-213ENST00000522590 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
IPCEF1-213ENST00000522590 PDE4CQ08493 712 aa12.42□□□□□ -0.42
IPCEF1-213ENST00000522590 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms