RNA–Protein interactions for RNA: ENST00000521961.1

LYRM2-206, Transcript of LYR motif containing 2, humanhuman

TSL 3

Gene LYRM2, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-206ENST00000521961 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
LYRM2-206ENST00000521961 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
LYRM2-206ENST00000521961 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
LYRM2-206ENST00000521961 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
LYRM2-206ENST00000521961 NISCHQ9Y2I1 1504 aa19.26■□□□□ 0.67
LYRM2-206ENST00000521961 FOXD1Q16676 465 aa19.19■□□□□ 0.66
LYRM2-206ENST00000521961 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
LYRM2-206ENST00000521961 MSH5O43196 834 aa18.1■□□□□ 0.49
LYRM2-206ENST00000521961 PIAS4Q8N2W9 510 aaPredicted RBP18.03■□□□□ 0.48
LYRM2-206ENST00000521961 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
LYRM2-206ENST00000521961 ADRA2BP18089 450 aa17.96■□□□□ 0.47
LYRM2-206ENST00000521961 ABCC9O60706 1549 aa17.68■□□□□ 0.42
LYRM2-206ENST00000521961 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
LYRM2-206ENST00000521961 POTEDQ86YR6 584 aa17.17■□□□□ 0.34
LYRM2-206ENST00000521961 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
LYRM2-206ENST00000521961 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
LYRM2-206ENST00000521961 DCAF8L2P0C7V8 631 aa16.73■□□□□ 0.27
LYRM2-206ENST00000521961 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
LYRM2-206ENST00000521961 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
LYRM2-206ENST00000521961 NACADO15069 1562 aa16.47■□□□□ 0.23
LYRM2-206ENST00000521961 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
LYRM2-206ENST00000521961 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
LYRM2-206ENST00000521961 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
LYRM2-206ENST00000521961 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
LYRM2-206ENST00000521961 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
LYRM2-206ENST00000521961 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
LYRM2-206ENST00000521961 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
LYRM2-206ENST00000521961 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
LYRM2-206ENST00000521961 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
LYRM2-206ENST00000521961 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
LYRM2-206ENST00000521961 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
LYRM2-206ENST00000521961 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
LYRM2-206ENST00000521961 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
LYRM2-206ENST00000521961 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
LYRM2-206ENST00000521961 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
LYRM2-206ENST00000521961 SCRIBQ14160 1630 aa15.83■□□□□ 0.12
LYRM2-206ENST00000521961 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
LYRM2-206ENST00000521961 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
LYRM2-206ENST00000521961 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
LYRM2-206ENST00000521961 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
LYRM2-206ENST00000521961 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
LYRM2-206ENST00000521961 ERCC6Q03468 1493 aa15.34■□□□□ 0.05
LYRM2-206ENST00000521961 KCNA4P22459 653 aa15.31■□□□□ 0.04
LYRM2-206ENST00000521961 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
LYRM2-206ENST00000521961 CUX2O14529 1486 aa15.28■□□□□ 0.04
LYRM2-206ENST00000521961 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
LYRM2-206ENST00000521961 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
LYRM2-206ENST00000521961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
LYRM2-206ENST00000521961 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
LYRM2-206ENST00000521961 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
LYRM2-206ENST00000521961 NESP48681 1621 aa15.07■□□□□ 0
LYRM2-206ENST00000521961 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
LYRM2-206ENST00000521961 HMGXB3Q12766 1538 aa15.03■□□□□ -0
LYRM2-206ENST00000521961 SMARCA4P51532 1647 aa15.03■□□□□ -0
LYRM2-206ENST00000521961 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
LYRM2-206ENST00000521961 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
LYRM2-206ENST00000521961 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
LYRM2-206ENST00000521961 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
LYRM2-206ENST00000521961 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
LYRM2-206ENST00000521961 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
LYRM2-206ENST00000521961 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
LYRM2-206ENST00000521961 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
LYRM2-206ENST00000521961 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
LYRM2-206ENST00000521961 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
LYRM2-206ENST00000521961 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
LYRM2-206ENST00000521961 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
LYRM2-206ENST00000521961 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
LYRM2-206ENST00000521961 APLP2Q06481 763 aa14.71□□□□□ -0.05
LYRM2-206ENST00000521961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
LYRM2-206ENST00000521961 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
LYRM2-206ENST00000521961 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
LYRM2-206ENST00000521961 WDR62O43379 1518 aa14.65□□□□□ -0.06
LYRM2-206ENST00000521961 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
LYRM2-206ENST00000521961 WIZO95785 1651 aa14.62□□□□□ -0.07
LYRM2-206ENST00000521961 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
LYRM2-206ENST00000521961 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
LYRM2-206ENST00000521961 CFTRP13569 1480 aa14.55□□□□□ -0.08
LYRM2-206ENST00000521961 CAPN15O75808 1086 aa14.53□□□□□ -0.08
LYRM2-206ENST00000521961 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
LYRM2-206ENST00000521961 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
LYRM2-206ENST00000521961 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
LYRM2-206ENST00000521961 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
LYRM2-206ENST00000521961 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
LYRM2-206ENST00000521961 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
LYRM2-206ENST00000521961 CYB5RLQ6IPT4 315 aa14.42□□□□□ -0.1
LYRM2-206ENST00000521961 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
LYRM2-206ENST00000521961 DSG3P32926 999 aa14.41□□□□□ -0.1
LYRM2-206ENST00000521961 FBLN2P98095 1184 aa14.41□□□□□ -0.1
LYRM2-206ENST00000521961 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
LYRM2-206ENST00000521961 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
LYRM2-206ENST00000521961 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
LYRM2-206ENST00000521961 CCDC88BA6NC98 1476 aa14.34□□□□□ -0.11
LYRM2-206ENST00000521961 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
LYRM2-206ENST00000521961 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
LYRM2-206ENST00000521961 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
LYRM2-206ENST00000521961 ABCC8Q09428 1581 aa14.31□□□□□ -0.12
LYRM2-206ENST00000521961 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
LYRM2-206ENST00000521961 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
LYRM2-206ENST00000521961 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
LYRM2-206ENST00000521961 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms