RNA–Protein interactions for RNA: ENST00000521160.5

FBXO38-220, Transcript of F-box protein 38, humanhuman

TSL 4

Gene FBXO38, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-220ENST00000521160 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
FBXO38-220ENST00000521160 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
FBXO38-220ENST00000521160 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
FBXO38-220ENST00000521160 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
FBXO38-220ENST00000521160 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
FBXO38-220ENST00000521160 FOXD1Q16676 465 aa18.74■□□□□ 0.59
FBXO38-220ENST00000521160 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
FBXO38-220ENST00000521160 MSH5O43196 834 aa17.58■□□□□ 0.4
FBXO38-220ENST00000521160 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
FBXO38-220ENST00000521160 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
FBXO38-220ENST00000521160 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
FBXO38-220ENST00000521160 ADRA2BP18089 450 aa17.31■□□□□ 0.36
FBXO38-220ENST00000521160 ABCC9O60706 1549 aa17.31■□□□□ 0.36
FBXO38-220ENST00000521160 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
FBXO38-220ENST00000521160 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
FBXO38-220ENST00000521160 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
FBXO38-220ENST00000521160 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
FBXO38-220ENST00000521160 NACADO15069 1562 aa16.23■□□□□ 0.19
FBXO38-220ENST00000521160 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
FBXO38-220ENST00000521160 UNC13AQ9UPW8 1703 aa15.98■□□□□ 0.15
FBXO38-220ENST00000521160 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
FBXO38-220ENST00000521160 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
FBXO38-220ENST00000521160 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
FBXO38-220ENST00000521160 BICRAQ9NZM4 1560 aa15.88■□□□□ 0.13
FBXO38-220ENST00000521160 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
FBXO38-220ENST00000521160 ZCCHC6Q5VYS8 1495 aaKnown RBP15.82■□□□□ 0.12
FBXO38-220ENST00000521160 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
FBXO38-220ENST00000521160 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
FBXO38-220ENST00000521160 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
FBXO38-220ENST00000521160 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
FBXO38-220ENST00000521160 SHROOM4Q9ULL8 1493 aa15.56■□□□□ 0.08
FBXO38-220ENST00000521160 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
FBXO38-220ENST00000521160 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
FBXO38-220ENST00000521160 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
FBXO38-220ENST00000521160 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
FBXO38-220ENST00000521160 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
FBXO38-220ENST00000521160 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
FBXO38-220ENST00000521160 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
FBXO38-220ENST00000521160 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
FBXO38-220ENST00000521160 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
FBXO38-220ENST00000521160 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
FBXO38-220ENST00000521160 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
FBXO38-220ENST00000521160 ERCC6Q03468 1493 aa14.94□□□□□ -0.02
FBXO38-220ENST00000521160 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
FBXO38-220ENST00000521160 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
FBXO38-220ENST00000521160 NESP48681 1621 aa14.86□□□□□ -0.03
FBXO38-220ENST00000521160 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
FBXO38-220ENST00000521160 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
FBXO38-220ENST00000521160 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
FBXO38-220ENST00000521160 CUX2O14529 1486 aa14.82□□□□□ -0.04
FBXO38-220ENST00000521160 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
FBXO38-220ENST00000521160 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
FBXO38-220ENST00000521160 C1QBPQ07021 282 aaKnown RBP14.76□□□□□ -0.05
FBXO38-220ENST00000521160 PEG3Q9GZU2 1588 aa14.72□□□□□ -0.05
FBXO38-220ENST00000521160 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
FBXO38-220ENST00000521160 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
FBXO38-220ENST00000521160 WIZO95785 1651 aa14.62□□□□□ -0.07
FBXO38-220ENST00000521160 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
FBXO38-220ENST00000521160 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
FBXO38-220ENST00000521160 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
FBXO38-220ENST00000521160 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
FBXO38-220ENST00000521160 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
FBXO38-220ENST00000521160 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
FBXO38-220ENST00000521160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■□□□□ 10.9
FBXO38-220ENST00000521160 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
FBXO38-220ENST00000521160 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
FBXO38-220ENST00000521160 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
FBXO38-220ENST00000521160 WDR62O43379 1518 aa14.39□□□□□ -0.11
FBXO38-220ENST00000521160 CFTRP13569 1480 aa14.38□□□□□ -0.11
FBXO38-220ENST00000521160 TOP2AP11388 1531 aaKnown RBP14.37□□□□□ -0.11
FBXO38-220ENST00000521160 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
FBXO38-220ENST00000521160 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
FBXO38-220ENST00000521160 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
FBXO38-220ENST00000521160 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
FBXO38-220ENST00000521160 KCNA4P22459 653 aa14.2□□□□□ -0.14
FBXO38-220ENST00000521160 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
FBXO38-220ENST00000521160 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
FBXO38-220ENST00000521160 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
FBXO38-220ENST00000521160 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
FBXO38-220ENST00000521160 FBLN2P98095 1184 aa14.1□□□□□ -0.15
FBXO38-220ENST00000521160 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
FBXO38-220ENST00000521160 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.161e-10■■□□□ 13.1
FBXO38-220ENST00000521160 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
FBXO38-220ENST00000521160 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
FBXO38-220ENST00000521160 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
FBXO38-220ENST00000521160 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
FBXO38-220ENST00000521160 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
FBXO38-220ENST00000521160 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
FBXO38-220ENST00000521160 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
FBXO38-220ENST00000521160 DSG3P32926 999 aa14□□□□□ -0.17
FBXO38-220ENST00000521160 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
FBXO38-220ENST00000521160 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
FBXO38-220ENST00000521160 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
FBXO38-220ENST00000521160 SOGA1O94964 1423 aa13.99□□□□□ -0.17
FBXO38-220ENST00000521160 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
FBXO38-220ENST00000521160 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
FBXO38-220ENST00000521160 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
FBXO38-220ENST00000521160 CAPN15O75808 1086 aa13.96□□□□□ -0.17
FBXO38-220ENST00000521160 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
FBXO38-220ENST00000521160 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms