RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
CTNNA1-217ENST00000519634 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
CTNNA1-217ENST00000519634 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
CTNNA1-217ENST00000519634 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
CTNNA1-217ENST00000519634 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
CTNNA1-217ENST00000519634 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
CTNNA1-217ENST00000519634 FOXD1Q16676 465 aa15.35■□□□□ 0.05
CTNNA1-217ENST00000519634 ABCC9O60706 1549 aa15.32■□□□□ 0.04
CTNNA1-217ENST00000519634 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
CTNNA1-217ENST00000519634 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
CTNNA1-217ENST00000519634 ADRA2BP18089 450 aa14.81□□□□□ -0.04
CTNNA1-217ENST00000519634 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
CTNNA1-217ENST00000519634 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
CTNNA1-217ENST00000519634 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
CTNNA1-217ENST00000519634 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTNNA1-217ENST00000519634 NACADO15069 1562 aa14.25□□□□□ -0.13
CTNNA1-217ENST00000519634 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
CTNNA1-217ENST00000519634 MSH5O43196 834 aa14.15□□□□□ -0.14
CTNNA1-217ENST00000519634 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
CTNNA1-217ENST00000519634 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
CTNNA1-217ENST00000519634 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
CTNNA1-217ENST00000519634 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
CTNNA1-217ENST00000519634 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
CTNNA1-217ENST00000519634 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
CTNNA1-217ENST00000519634 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
CTNNA1-217ENST00000519634 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
CTNNA1-217ENST00000519634 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-217ENST00000519634 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
CTNNA1-217ENST00000519634 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-217ENST00000519634 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-217ENST00000519634 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
CTNNA1-217ENST00000519634 KCNA4P22459 653 aa13.51□□□□□ -0.25
CTNNA1-217ENST00000519634 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-217ENST00000519634 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-217ENST00000519634 CUX2O14529 1486 aa13.38□□□□□ -0.27
CTNNA1-217ENST00000519634 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
CTNNA1-217ENST00000519634 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
CTNNA1-217ENST00000519634 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
CTNNA1-217ENST00000519634 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-217ENST00000519634 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
CTNNA1-217ENST00000519634 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CTNNA1-217ENST00000519634 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-217ENST00000519634 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
CTNNA1-217ENST00000519634 NESP48681 1621 aa13.03□□□□□ -0.32
CTNNA1-217ENST00000519634 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-217ENST00000519634 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
CTNNA1-217ENST00000519634 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
CTNNA1-217ENST00000519634 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-217ENST00000519634 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-217ENST00000519634 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
CTNNA1-217ENST00000519634 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
CTNNA1-217ENST00000519634 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
CTNNA1-217ENST00000519634 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-217ENST00000519634 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-217ENST00000519634 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
CTNNA1-217ENST00000519634 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
CTNNA1-217ENST00000519634 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
CTNNA1-217ENST00000519634 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
CTNNA1-217ENST00000519634 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
CTNNA1-217ENST00000519634 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
CTNNA1-217ENST00000519634 WDR62O43379 1518 aa12.73□□□□□ -0.37
CTNNA1-217ENST00000519634 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.37
CTNNA1-217ENST00000519634 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
CTNNA1-217ENST00000519634 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
CTNNA1-217ENST00000519634 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
CTNNA1-217ENST00000519634 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
CTNNA1-217ENST00000519634 CFTRP13569 1480 aa12.56□□□□□ -0.4
CTNNA1-217ENST00000519634 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-217ENST00000519634 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
CTNNA1-217ENST00000519634 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
CTNNA1-217ENST00000519634 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
CTNNA1-217ENST00000519634 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
CTNNA1-217ENST00000519634 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
CTNNA1-217ENST00000519634 WIZO95785 1651 aa12.47□□□□□ -0.41
CTNNA1-217ENST00000519634 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
CTNNA1-217ENST00000519634 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-217ENST00000519634 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
CTNNA1-217ENST00000519634 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
CTNNA1-217ENST00000519634 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
CTNNA1-217ENST00000519634 ZBTB22O15209 634 aa12.42□□□□□ -0.42
CTNNA1-217ENST00000519634 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-217ENST00000519634 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-217ENST00000519634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.439e-8■□□□□ 9.6
CTNNA1-217ENST00000519634 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-217ENST00000519634 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
CTNNA1-217ENST00000519634 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CTNNA1-217ENST00000519634 ABCC8Q09428 1581 aa12.31□□□□□ -0.44
CTNNA1-217ENST00000519634 FBLN2P98095 1184 aa12.31□□□□□ -0.44
CTNNA1-217ENST00000519634 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.448e-7■■■■■ 28.7
CTNNA1-217ENST00000519634 EIF4G3O43432 1585 aaKnown RBP12.27□□□□□ -0.44
CTNNA1-217ENST00000519634 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
CTNNA1-217ENST00000519634 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-217ENST00000519634 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
CTNNA1-217ENST00000519634 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-217ENST00000519634 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-217ENST00000519634 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-217ENST00000519634 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-217ENST00000519634 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-217ENST00000519634 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CTNNA1-217ENST00000519634 CHD1O14646 1710 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms