RNA–Protein interactions for RNA: ENST00000518173.5

PTK2-208, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2

Gene PTK2, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-208ENST00000518173 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
PTK2-208ENST00000518173 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
PTK2-208ENST00000518173 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
PTK2-208ENST00000518173 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
PTK2-208ENST00000518173 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
PTK2-208ENST00000518173 FOXD1Q16676 465 aa18.36■□□□□ 0.53
PTK2-208ENST00000518173 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
PTK2-208ENST00000518173 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
PTK2-208ENST00000518173 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
PTK2-208ENST00000518173 ADRA2BP18089 450 aa17.38■□□□□ 0.37
PTK2-208ENST00000518173 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
PTK2-208ENST00000518173 MSH5O43196 834 aa17.11■□□□□ 0.33
PTK2-208ENST00000518173 ABCC9O60706 1549 aa17.11■□□□□ 0.33
PTK2-208ENST00000518173 NACADO15069 1562 aa16.52■□□□□ 0.24
PTK2-208ENST00000518173 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
PTK2-208ENST00000518173 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
PTK2-208ENST00000518173 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
PTK2-208ENST00000518173 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
PTK2-208ENST00000518173 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
PTK2-208ENST00000518173 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
PTK2-208ENST00000518173 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
PTK2-208ENST00000518173 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
PTK2-208ENST00000518173 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
PTK2-208ENST00000518173 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
PTK2-208ENST00000518173 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
PTK2-208ENST00000518173 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
PTK2-208ENST00000518173 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
PTK2-208ENST00000518173 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
PTK2-208ENST00000518173 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
PTK2-208ENST00000518173 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
PTK2-208ENST00000518173 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
PTK2-208ENST00000518173 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
PTK2-208ENST00000518173 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
PTK2-208ENST00000518173 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
PTK2-208ENST00000518173 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
PTK2-208ENST00000518173 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
PTK2-208ENST00000518173 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
PTK2-208ENST00000518173 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
PTK2-208ENST00000518173 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
PTK2-208ENST00000518173 ATAD2BQ9ULI0 1458 aa15.24■□□□□ 0.03
PTK2-208ENST00000518173 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
PTK2-208ENST00000518173 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
PTK2-208ENST00000518173 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
PTK2-208ENST00000518173 HMGXB3Q12766 1538 aa15.15■□□□□ 0.02
PTK2-208ENST00000518173 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
PTK2-208ENST00000518173 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
PTK2-208ENST00000518173 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
PTK2-208ENST00000518173 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
PTK2-208ENST00000518173 KCNA4P22459 653 aa15.05■□□□□ -0
PTK2-208ENST00000518173 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
PTK2-208ENST00000518173 WIZO95785 1651 aa14.92□□□□□ -0.02
PTK2-208ENST00000518173 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
PTK2-208ENST00000518173 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
PTK2-208ENST00000518173 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
PTK2-208ENST00000518173 NESP48681 1621 aa14.78□□□□□ -0.04
PTK2-208ENST00000518173 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
PTK2-208ENST00000518173 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
PTK2-208ENST00000518173 CFTRP13569 1480 aa14.72□□□□□ -0.05
PTK2-208ENST00000518173 CUX2O14529 1486 aa14.69□□□□□ -0.06
PTK2-208ENST00000518173 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
PTK2-208ENST00000518173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■□□□□ 10.7
PTK2-208ENST00000518173 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
PTK2-208ENST00000518173 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
PTK2-208ENST00000518173 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
PTK2-208ENST00000518173 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
PTK2-208ENST00000518173 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
PTK2-208ENST00000518173 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
PTK2-208ENST00000518173 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
PTK2-208ENST00000518173 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
PTK2-208ENST00000518173 WDR62O43379 1518 aa14.51□□□□□ -0.09
PTK2-208ENST00000518173 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
PTK2-208ENST00000518173 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
PTK2-208ENST00000518173 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
PTK2-208ENST00000518173 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
PTK2-208ENST00000518173 TOPBP1Q92547 1522 aa14.35□□□□□ -0.11
PTK2-208ENST00000518173 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
PTK2-208ENST00000518173 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
PTK2-208ENST00000518173 SLC4A1APQ9BWU0 796 aaKnown RBP14.31□□□□□ -0.12
PTK2-208ENST00000518173 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
PTK2-208ENST00000518173 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
PTK2-208ENST00000518173 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
PTK2-208ENST00000518173 POLA1P09884 1462 aaPredicted RBP14.23□□□□□ -0.13
PTK2-208ENST00000518173 CUX1P39880 1505 aa14.21□□□□□ -0.13
PTK2-208ENST00000518173 SOGA1O94964 1423 aa14.2□□□□□ -0.14
PTK2-208ENST00000518173 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
PTK2-208ENST00000518173 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
PTK2-208ENST00000518173 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
PTK2-208ENST00000518173 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
PTK2-208ENST00000518173 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
PTK2-208ENST00000518173 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
PTK2-208ENST00000518173 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
PTK2-208ENST00000518173 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTK2-208ENST00000518173 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
PTK2-208ENST00000518173 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
PTK2-208ENST00000518173 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
PTK2-208ENST00000518173 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
PTK2-208ENST00000518173 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
PTK2-208ENST00000518173 GRIN2BQ13224 1484 aa14.04□□□□□ -0.16
PTK2-208ENST00000518173 SYNJ1O43426 1573 aa14.03□□□□□ -0.16
PTK2-208ENST00000518173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms